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Approach strategies and application of metabolomics to biotechnology in plants

Metabolomics refers to the technology for the comprehensive analysis of metabolites and low-molecular-weight compounds in a biological system, such as cells or tissues. Metabolites play an important role in biological phenomena through their direct involvement in the regulation of physiological mech...

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Autores principales: Oh, Seon-Woo, Imran, Muhammad, Kim, Eun-Ha, Park, Soo-Yun, Lee, Sang-Gu, Park, Hyoun-Min, Jung, Jung-Won, Ryu, Tae-Hun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451086/
https://www.ncbi.nlm.nih.gov/pubmed/37636096
http://dx.doi.org/10.3389/fpls.2023.1192235
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author Oh, Seon-Woo
Imran, Muhammad
Kim, Eun-Ha
Park, Soo-Yun
Lee, Sang-Gu
Park, Hyoun-Min
Jung, Jung-Won
Ryu, Tae-Hun
author_facet Oh, Seon-Woo
Imran, Muhammad
Kim, Eun-Ha
Park, Soo-Yun
Lee, Sang-Gu
Park, Hyoun-Min
Jung, Jung-Won
Ryu, Tae-Hun
author_sort Oh, Seon-Woo
collection PubMed
description Metabolomics refers to the technology for the comprehensive analysis of metabolites and low-molecular-weight compounds in a biological system, such as cells or tissues. Metabolites play an important role in biological phenomena through their direct involvement in the regulation of physiological mechanisms, such as maintaining cell homeostasis or signal transmission through protein–protein interactions. The current review aims provide a framework for how the integrated analysis of metabolites, their functional actions and inherent biological information can be used to understand biological phenomena related to the regulation of metabolites and how this information can be applied to safety assessments of crops created using biotechnology. Advancement in technology and analytical instrumentation have led new ways to examine the convergence between biology and chemistry, which has yielded a deeper understanding of complex biological phenomena. Metabolomics can be utilized and applied to safety assessments of biotechnology products through a systematic approach using metabolite-level data processing algorithms, statistical techniques, and database development. The integration of metabolomics data with sequencing data is a key step towards improving additional phenotypical evidence to elucidate the degree of environmental affects for variants found in genome associated with metabolic processes. Moreover, information analysis technology such as big data, machine learning, and IT investment must be introduced to establish a system for data extraction, selection, and metabolomic data analysis for the interpretation of biological implications of biotechnology innovations. This review outlines the integrity of metabolomics assessments in determining the consequences of genetic engineering and biotechnology in plants.
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spelling pubmed-104510862023-08-26 Approach strategies and application of metabolomics to biotechnology in plants Oh, Seon-Woo Imran, Muhammad Kim, Eun-Ha Park, Soo-Yun Lee, Sang-Gu Park, Hyoun-Min Jung, Jung-Won Ryu, Tae-Hun Front Plant Sci Plant Science Metabolomics refers to the technology for the comprehensive analysis of metabolites and low-molecular-weight compounds in a biological system, such as cells or tissues. Metabolites play an important role in biological phenomena through their direct involvement in the regulation of physiological mechanisms, such as maintaining cell homeostasis or signal transmission through protein–protein interactions. The current review aims provide a framework for how the integrated analysis of metabolites, their functional actions and inherent biological information can be used to understand biological phenomena related to the regulation of metabolites and how this information can be applied to safety assessments of crops created using biotechnology. Advancement in technology and analytical instrumentation have led new ways to examine the convergence between biology and chemistry, which has yielded a deeper understanding of complex biological phenomena. Metabolomics can be utilized and applied to safety assessments of biotechnology products through a systematic approach using metabolite-level data processing algorithms, statistical techniques, and database development. The integration of metabolomics data with sequencing data is a key step towards improving additional phenotypical evidence to elucidate the degree of environmental affects for variants found in genome associated with metabolic processes. Moreover, information analysis technology such as big data, machine learning, and IT investment must be introduced to establish a system for data extraction, selection, and metabolomic data analysis for the interpretation of biological implications of biotechnology innovations. This review outlines the integrity of metabolomics assessments in determining the consequences of genetic engineering and biotechnology in plants. Frontiers Media S.A. 2023-08-11 /pmc/articles/PMC10451086/ /pubmed/37636096 http://dx.doi.org/10.3389/fpls.2023.1192235 Text en Copyright © 2023 Oh, Imran, Kim, Park, Lee, Park, Jung and Ryu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Oh, Seon-Woo
Imran, Muhammad
Kim, Eun-Ha
Park, Soo-Yun
Lee, Sang-Gu
Park, Hyoun-Min
Jung, Jung-Won
Ryu, Tae-Hun
Approach strategies and application of metabolomics to biotechnology in plants
title Approach strategies and application of metabolomics to biotechnology in plants
title_full Approach strategies and application of metabolomics to biotechnology in plants
title_fullStr Approach strategies and application of metabolomics to biotechnology in plants
title_full_unstemmed Approach strategies and application of metabolomics to biotechnology in plants
title_short Approach strategies and application of metabolomics to biotechnology in plants
title_sort approach strategies and application of metabolomics to biotechnology in plants
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451086/
https://www.ncbi.nlm.nih.gov/pubmed/37636096
http://dx.doi.org/10.3389/fpls.2023.1192235
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