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Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach

Abdominal computed tomography (CT) is a frequently used imaging modality for evaluating gastrointestinal diseases. The detection of colorectal cancer is often realized using CT before a more invasive colonoscopy. When a CT exam is performed for indications other than colorectal evaluation, the tortu...

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Autores principales: Sahoo, Prasan Kumar, Gupta, Pushpanjali, Lai, Ying-Chieh, Chiang, Sum-Fu, You, Jeng-Fu, Onthoni, Djeane Debora, Chern, Yih-Jong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451186/
https://www.ncbi.nlm.nih.gov/pubmed/37627857
http://dx.doi.org/10.3390/bioengineering10080972
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author Sahoo, Prasan Kumar
Gupta, Pushpanjali
Lai, Ying-Chieh
Chiang, Sum-Fu
You, Jeng-Fu
Onthoni, Djeane Debora
Chern, Yih-Jong
author_facet Sahoo, Prasan Kumar
Gupta, Pushpanjali
Lai, Ying-Chieh
Chiang, Sum-Fu
You, Jeng-Fu
Onthoni, Djeane Debora
Chern, Yih-Jong
author_sort Sahoo, Prasan Kumar
collection PubMed
description Abdominal computed tomography (CT) is a frequently used imaging modality for evaluating gastrointestinal diseases. The detection of colorectal cancer is often realized using CT before a more invasive colonoscopy. When a CT exam is performed for indications other than colorectal evaluation, the tortuous structure of the long, tubular colon makes it difficult to analyze the colon carefully and thoroughly. In addition, the sensitivity of CT in detecting colorectal cancer is greatly dependent on the size of the tumor. Missed incidental colon cancers using CT are an emerging problem for clinicians and radiologists; consequently, the automatic localization of lesions in the CT images of unprepared bowels is needed. Therefore, this study used artificial intelligence (AI) to localize colorectal cancer in CT images. We enrolled 190 colorectal cancer patients to obtain 1558 tumor slices annotated by radiologists and colorectal surgeons. The tumor sites were double-confirmed via colonoscopy or other related examinations, including physical examination or image study, and the final tumor sites were obtained from the operation records if available. The localization and training models used were RetinaNet, YOLOv3, and YOLOv8. We achieved an F1 score of 0.97 (±0.002), a mAP of 0.984 when performing slice-wise testing, 0.83 (±0.29) sensitivity, 0.97 (±0.01) specificity, and 0.96 (±0.01) accuracy when performing patient-wise testing using our derived model YOLOv8 with hyperparameter tuning.
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spelling pubmed-104511862023-08-26 Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach Sahoo, Prasan Kumar Gupta, Pushpanjali Lai, Ying-Chieh Chiang, Sum-Fu You, Jeng-Fu Onthoni, Djeane Debora Chern, Yih-Jong Bioengineering (Basel) Article Abdominal computed tomography (CT) is a frequently used imaging modality for evaluating gastrointestinal diseases. The detection of colorectal cancer is often realized using CT before a more invasive colonoscopy. When a CT exam is performed for indications other than colorectal evaluation, the tortuous structure of the long, tubular colon makes it difficult to analyze the colon carefully and thoroughly. In addition, the sensitivity of CT in detecting colorectal cancer is greatly dependent on the size of the tumor. Missed incidental colon cancers using CT are an emerging problem for clinicians and radiologists; consequently, the automatic localization of lesions in the CT images of unprepared bowels is needed. Therefore, this study used artificial intelligence (AI) to localize colorectal cancer in CT images. We enrolled 190 colorectal cancer patients to obtain 1558 tumor slices annotated by radiologists and colorectal surgeons. The tumor sites were double-confirmed via colonoscopy or other related examinations, including physical examination or image study, and the final tumor sites were obtained from the operation records if available. The localization and training models used were RetinaNet, YOLOv3, and YOLOv8. We achieved an F1 score of 0.97 (±0.002), a mAP of 0.984 when performing slice-wise testing, 0.83 (±0.29) sensitivity, 0.97 (±0.01) specificity, and 0.96 (±0.01) accuracy when performing patient-wise testing using our derived model YOLOv8 with hyperparameter tuning. MDPI 2023-08-17 /pmc/articles/PMC10451186/ /pubmed/37627857 http://dx.doi.org/10.3390/bioengineering10080972 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sahoo, Prasan Kumar
Gupta, Pushpanjali
Lai, Ying-Chieh
Chiang, Sum-Fu
You, Jeng-Fu
Onthoni, Djeane Debora
Chern, Yih-Jong
Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title_full Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title_fullStr Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title_full_unstemmed Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title_short Localization of Colorectal Cancer Lesions in Contrast-Computed Tomography Images via a Deep Learning Approach
title_sort localization of colorectal cancer lesions in contrast-computed tomography images via a deep learning approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451186/
https://www.ncbi.nlm.nih.gov/pubmed/37627857
http://dx.doi.org/10.3390/bioengineering10080972
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