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WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm

Medical image segmentation can effectively identify lesions in medicine, but some small and rare lesions cannot be well identified. Existing studies do not take into account the uncertainty of the occurrence of diseased tissue, and the problem of long-tailed distribution of medical data. Meanwhile,...

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Autores principales: Pan, Haixia, Gao, Bo, Bai, Wenpei, Li, Bin, Li, Yanan, Zhang, Meng, Wang, Hongqiang, Zhao, Xiaoran, Chen, Minghuang, Yin, Cong, Kong, Weiya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451191/
https://www.ncbi.nlm.nih.gov/pubmed/37627829
http://dx.doi.org/10.3390/bioengineering10080945
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author Pan, Haixia
Gao, Bo
Bai, Wenpei
Li, Bin
Li, Yanan
Zhang, Meng
Wang, Hongqiang
Zhao, Xiaoran
Chen, Minghuang
Yin, Cong
Kong, Weiya
author_facet Pan, Haixia
Gao, Bo
Bai, Wenpei
Li, Bin
Li, Yanan
Zhang, Meng
Wang, Hongqiang
Zhao, Xiaoran
Chen, Minghuang
Yin, Cong
Kong, Weiya
author_sort Pan, Haixia
collection PubMed
description Medical image segmentation can effectively identify lesions in medicine, but some small and rare lesions cannot be well identified. Existing studies do not take into account the uncertainty of the occurrence of diseased tissue, and the problem of long-tailed distribution of medical data. Meanwhile, the grayscale image obtained from Magnetic Resonance Imaging (MRI) detection has problems, such as the features being difficult to extract and invalid features being difficult to distinguish. In order to solve these problems, we propose a new weighted attention ResUNet (WA-ResUNet) and a class weight formula based on the number of images contained in the class, which improves the performance of the model in the low-frequency class and the overall effect of the model by improving the degree of attention paid to the valid features and invalid ones and rebalancing the learning efficiency among the classes. We evaluated our method on an uterine MRI dataset and compared it with the ResUNet. WA-ResUNet increased Intersection over Union (IoU) in the low-frequency class (Nabothian cysts) by 21.87%, and the overall mIoU increased by more than 6.5%.
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spelling pubmed-104511912023-08-26 WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm Pan, Haixia Gao, Bo Bai, Wenpei Li, Bin Li, Yanan Zhang, Meng Wang, Hongqiang Zhao, Xiaoran Chen, Minghuang Yin, Cong Kong, Weiya Bioengineering (Basel) Article Medical image segmentation can effectively identify lesions in medicine, but some small and rare lesions cannot be well identified. Existing studies do not take into account the uncertainty of the occurrence of diseased tissue, and the problem of long-tailed distribution of medical data. Meanwhile, the grayscale image obtained from Magnetic Resonance Imaging (MRI) detection has problems, such as the features being difficult to extract and invalid features being difficult to distinguish. In order to solve these problems, we propose a new weighted attention ResUNet (WA-ResUNet) and a class weight formula based on the number of images contained in the class, which improves the performance of the model in the low-frequency class and the overall effect of the model by improving the degree of attention paid to the valid features and invalid ones and rebalancing the learning efficiency among the classes. We evaluated our method on an uterine MRI dataset and compared it with the ResUNet. WA-ResUNet increased Intersection over Union (IoU) in the low-frequency class (Nabothian cysts) by 21.87%, and the overall mIoU increased by more than 6.5%. MDPI 2023-08-08 /pmc/articles/PMC10451191/ /pubmed/37627829 http://dx.doi.org/10.3390/bioengineering10080945 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pan, Haixia
Gao, Bo
Bai, Wenpei
Li, Bin
Li, Yanan
Zhang, Meng
Wang, Hongqiang
Zhao, Xiaoran
Chen, Minghuang
Yin, Cong
Kong, Weiya
WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title_full WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title_fullStr WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title_full_unstemmed WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title_short WA-ResUNet: A Focused Tail Class MRI Medical Image Segmentation Algorithm
title_sort wa-resunet: a focused tail class mri medical image segmentation algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451191/
https://www.ncbi.nlm.nih.gov/pubmed/37627829
http://dx.doi.org/10.3390/bioengineering10080945
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