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CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas
Deep networks have shown strong performance in glioma grading; however, interpreting their decisions remains challenging due to glioma heterogeneity. To address these challenges, the proposed solution is the Causal Segmentation Framework (CSF). This framework aims to accurately predict high- and low...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451284/ https://www.ncbi.nlm.nih.gov/pubmed/37627772 http://dx.doi.org/10.3390/bioengineering10080887 |
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author | Zheng, Yao Huang, Dong Feng, Yuefei Hao, Xiaoshuo He, Yutao Liu, Yang |
author_facet | Zheng, Yao Huang, Dong Feng, Yuefei Hao, Xiaoshuo He, Yutao Liu, Yang |
author_sort | Zheng, Yao |
collection | PubMed |
description | Deep networks have shown strong performance in glioma grading; however, interpreting their decisions remains challenging due to glioma heterogeneity. To address these challenges, the proposed solution is the Causal Segmentation Framework (CSF). This framework aims to accurately predict high- and low-grade gliomas while simultaneously highlighting key subregions. Our framework utilizes a shrinkage segmentation method to identify subregions containing essential decision information. Moreover, we introduce a glioma grading module that combines deep learning and traditional approaches for precise grading. Our proposed model achieves the best performance among all models, with an AUC of 96.14%, an F1 score of 93.74%, an accuracy of 91.04%, a sensitivity of 91.83%, and a specificity of 88.88%. Additionally, our model exhibits efficient resource utilization, completing predictions within 2.31s and occupying only 0.12 GB of memory during the test phase. Furthermore, our approach provides clear and specific visualizations of key subregions, surpassing other methods in terms of interpretability. In conclusion, the Causal Segmentation Framework (CSF) demonstrates its effectiveness at accurately predicting glioma grades and identifying key subregions. The inclusion of causality in the CSF model enhances the reliability and accuracy of preoperative decision-making for gliomas. The interpretable results provided by the CSF model can assist clinicians in their assessment and treatment planning. |
format | Online Article Text |
id | pubmed-10451284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104512842023-08-26 CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas Zheng, Yao Huang, Dong Feng, Yuefei Hao, Xiaoshuo He, Yutao Liu, Yang Bioengineering (Basel) Article Deep networks have shown strong performance in glioma grading; however, interpreting their decisions remains challenging due to glioma heterogeneity. To address these challenges, the proposed solution is the Causal Segmentation Framework (CSF). This framework aims to accurately predict high- and low-grade gliomas while simultaneously highlighting key subregions. Our framework utilizes a shrinkage segmentation method to identify subregions containing essential decision information. Moreover, we introduce a glioma grading module that combines deep learning and traditional approaches for precise grading. Our proposed model achieves the best performance among all models, with an AUC of 96.14%, an F1 score of 93.74%, an accuracy of 91.04%, a sensitivity of 91.83%, and a specificity of 88.88%. Additionally, our model exhibits efficient resource utilization, completing predictions within 2.31s and occupying only 0.12 GB of memory during the test phase. Furthermore, our approach provides clear and specific visualizations of key subregions, surpassing other methods in terms of interpretability. In conclusion, the Causal Segmentation Framework (CSF) demonstrates its effectiveness at accurately predicting glioma grades and identifying key subregions. The inclusion of causality in the CSF model enhances the reliability and accuracy of preoperative decision-making for gliomas. The interpretable results provided by the CSF model can assist clinicians in their assessment and treatment planning. MDPI 2023-07-26 /pmc/articles/PMC10451284/ /pubmed/37627772 http://dx.doi.org/10.3390/bioengineering10080887 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zheng, Yao Huang, Dong Feng, Yuefei Hao, Xiaoshuo He, Yutao Liu, Yang CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title | CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title_full | CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title_fullStr | CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title_full_unstemmed | CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title_short | CSF-Glioma: A Causal Segmentation Framework for Accurate Grading and Subregion Identification of Gliomas |
title_sort | csf-glioma: a causal segmentation framework for accurate grading and subregion identification of gliomas |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10451284/ https://www.ncbi.nlm.nih.gov/pubmed/37627772 http://dx.doi.org/10.3390/bioengineering10080887 |
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