Cargando…
The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landsca...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10452384/ https://www.ncbi.nlm.nih.gov/pubmed/37626815 http://dx.doi.org/10.3390/biomedicines11082318 |
_version_ | 1785095658034692096 |
---|---|
author | Zhou, Yuanyuan Huang, Xucheng Wang, Liya Luo, Yujia |
author_facet | Zhou, Yuanyuan Huang, Xucheng Wang, Liya Luo, Yujia |
author_sort | Zhou, Yuanyuan |
collection | PubMed |
description | Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landscape of prognostic power are still undisclosed. Methods: Various sequence and clinical data extracted from 33 cancers were utilized to generate a comprehensive overview of RECQs in the landscape. Afterward, we discovered variations in gene expression, potential enrichment of functions, genetic alterations, and analysis related to the immune response in tumors. Additionally, we explored the clinical characteristics and diagnostic significance of RECQs. And the important association of RECQL4 with liver hepatocellular carcinoma (LIHC) was investigated. Results: RECQs exhibited extensive mutations in different types of cancers. The expression of RECQ may be influenced by an oncogenic mutation in certain types of cancer, resulting in the observed genomic and epigenetic changes in diverse tumor formations. Furthermore, RECQs originating from tumors exhibited a significant association with the immune microenvironment of the tumor, indicating their potential as promising targets for therapy. Patient prognosis was significantly associated with the majority of genes in the RECQ family. In LIHC, RECQL4 eventually emerged as a separate prognostic determinant. Conclusions: To summarize, RECQs are essential for the regulation of the immune system in tumors, and RECQL4 serves as a prognostic indicator in LIHC. The results of our study offer fresh perspectives on RECQs from a bioinformatics perspective and emphasize the importance of RECQs in the diagnosis and treatment of cancer. |
format | Online Article Text |
id | pubmed-10452384 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104523842023-08-26 The Expression Characteristics and Function of the RECQ Family in Pan-Cancer Zhou, Yuanyuan Huang, Xucheng Wang, Liya Luo, Yujia Biomedicines Article Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landscape of prognostic power are still undisclosed. Methods: Various sequence and clinical data extracted from 33 cancers were utilized to generate a comprehensive overview of RECQs in the landscape. Afterward, we discovered variations in gene expression, potential enrichment of functions, genetic alterations, and analysis related to the immune response in tumors. Additionally, we explored the clinical characteristics and diagnostic significance of RECQs. And the important association of RECQL4 with liver hepatocellular carcinoma (LIHC) was investigated. Results: RECQs exhibited extensive mutations in different types of cancers. The expression of RECQ may be influenced by an oncogenic mutation in certain types of cancer, resulting in the observed genomic and epigenetic changes in diverse tumor formations. Furthermore, RECQs originating from tumors exhibited a significant association with the immune microenvironment of the tumor, indicating their potential as promising targets for therapy. Patient prognosis was significantly associated with the majority of genes in the RECQ family. In LIHC, RECQL4 eventually emerged as a separate prognostic determinant. Conclusions: To summarize, RECQs are essential for the regulation of the immune system in tumors, and RECQL4 serves as a prognostic indicator in LIHC. The results of our study offer fresh perspectives on RECQs from a bioinformatics perspective and emphasize the importance of RECQs in the diagnosis and treatment of cancer. MDPI 2023-08-21 /pmc/articles/PMC10452384/ /pubmed/37626815 http://dx.doi.org/10.3390/biomedicines11082318 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhou, Yuanyuan Huang, Xucheng Wang, Liya Luo, Yujia The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title | The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title_full | The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title_fullStr | The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title_full_unstemmed | The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title_short | The Expression Characteristics and Function of the RECQ Family in Pan-Cancer |
title_sort | expression characteristics and function of the recq family in pan-cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10452384/ https://www.ncbi.nlm.nih.gov/pubmed/37626815 http://dx.doi.org/10.3390/biomedicines11082318 |
work_keys_str_mv | AT zhouyuanyuan theexpressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT huangxucheng theexpressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT wangliya theexpressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT luoyujia theexpressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT zhouyuanyuan expressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT huangxucheng expressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT wangliya expressioncharacteristicsandfunctionoftherecqfamilyinpancancer AT luoyujia expressioncharacteristicsandfunctionoftherecqfamilyinpancancer |