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The Expression Characteristics and Function of the RECQ Family in Pan-Cancer

Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landsca...

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Autores principales: Zhou, Yuanyuan, Huang, Xucheng, Wang, Liya, Luo, Yujia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10452384/
https://www.ncbi.nlm.nih.gov/pubmed/37626815
http://dx.doi.org/10.3390/biomedicines11082318
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author Zhou, Yuanyuan
Huang, Xucheng
Wang, Liya
Luo, Yujia
author_facet Zhou, Yuanyuan
Huang, Xucheng
Wang, Liya
Luo, Yujia
author_sort Zhou, Yuanyuan
collection PubMed
description Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landscape of prognostic power are still undisclosed. Methods: Various sequence and clinical data extracted from 33 cancers were utilized to generate a comprehensive overview of RECQs in the landscape. Afterward, we discovered variations in gene expression, potential enrichment of functions, genetic alterations, and analysis related to the immune response in tumors. Additionally, we explored the clinical characteristics and diagnostic significance of RECQs. And the important association of RECQL4 with liver hepatocellular carcinoma (LIHC) was investigated. Results: RECQs exhibited extensive mutations in different types of cancers. The expression of RECQ may be influenced by an oncogenic mutation in certain types of cancer, resulting in the observed genomic and epigenetic changes in diverse tumor formations. Furthermore, RECQs originating from tumors exhibited a significant association with the immune microenvironment of the tumor, indicating their potential as promising targets for therapy. Patient prognosis was significantly associated with the majority of genes in the RECQ family. In LIHC, RECQL4 eventually emerged as a separate prognostic determinant. Conclusions: To summarize, RECQs are essential for the regulation of the immune system in tumors, and RECQL4 serves as a prognostic indicator in LIHC. The results of our study offer fresh perspectives on RECQs from a bioinformatics perspective and emphasize the importance of RECQs in the diagnosis and treatment of cancer.
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spelling pubmed-104523842023-08-26 The Expression Characteristics and Function of the RECQ Family in Pan-Cancer Zhou, Yuanyuan Huang, Xucheng Wang, Liya Luo, Yujia Biomedicines Article Background: The genes of the RECQ DNA helicase family play a part in preserving the stability of the genome and controlling different disease mechanisms. However, the expression features of RECQs in relation to pan-cancer, their correlation with the immune microenvironment of tumors, and the landscape of prognostic power are still undisclosed. Methods: Various sequence and clinical data extracted from 33 cancers were utilized to generate a comprehensive overview of RECQs in the landscape. Afterward, we discovered variations in gene expression, potential enrichment of functions, genetic alterations, and analysis related to the immune response in tumors. Additionally, we explored the clinical characteristics and diagnostic significance of RECQs. And the important association of RECQL4 with liver hepatocellular carcinoma (LIHC) was investigated. Results: RECQs exhibited extensive mutations in different types of cancers. The expression of RECQ may be influenced by an oncogenic mutation in certain types of cancer, resulting in the observed genomic and epigenetic changes in diverse tumor formations. Furthermore, RECQs originating from tumors exhibited a significant association with the immune microenvironment of the tumor, indicating their potential as promising targets for therapy. Patient prognosis was significantly associated with the majority of genes in the RECQ family. In LIHC, RECQL4 eventually emerged as a separate prognostic determinant. Conclusions: To summarize, RECQs are essential for the regulation of the immune system in tumors, and RECQL4 serves as a prognostic indicator in LIHC. The results of our study offer fresh perspectives on RECQs from a bioinformatics perspective and emphasize the importance of RECQs in the diagnosis and treatment of cancer. MDPI 2023-08-21 /pmc/articles/PMC10452384/ /pubmed/37626815 http://dx.doi.org/10.3390/biomedicines11082318 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhou, Yuanyuan
Huang, Xucheng
Wang, Liya
Luo, Yujia
The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title_full The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title_fullStr The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title_full_unstemmed The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title_short The Expression Characteristics and Function of the RECQ Family in Pan-Cancer
title_sort expression characteristics and function of the recq family in pan-cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10452384/
https://www.ncbi.nlm.nih.gov/pubmed/37626815
http://dx.doi.org/10.3390/biomedicines11082318
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