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Automating Model Comparison in Factor Graphs
Bayesian state and parameter estimation are automated effectively in a variety of probabilistic programming languages. The process of model comparison on the other hand, which still requires error-prone and time-consuming manual derivations, is often overlooked despite its importance. This paper eff...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10453220/ https://www.ncbi.nlm.nih.gov/pubmed/37628168 http://dx.doi.org/10.3390/e25081138 |
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author | van Erp, Bart Nuijten, Wouter W. L. van de Laar, Thijs de Vries, Bert |
author_facet | van Erp, Bart Nuijten, Wouter W. L. van de Laar, Thijs de Vries, Bert |
author_sort | van Erp, Bart |
collection | PubMed |
description | Bayesian state and parameter estimation are automated effectively in a variety of probabilistic programming languages. The process of model comparison on the other hand, which still requires error-prone and time-consuming manual derivations, is often overlooked despite its importance. This paper efficiently automates Bayesian model averaging, selection, and combination by message passing on a Forney-style factor graph with a custom mixture node. Parameter and state inference, and model comparison can then be executed simultaneously using message passing with scale factors. This approach shortens the model design cycle and allows for the straightforward extension to hierarchical and temporal model priors to accommodate for modeling complicated time-varying processes. |
format | Online Article Text |
id | pubmed-10453220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104532202023-08-26 Automating Model Comparison in Factor Graphs van Erp, Bart Nuijten, Wouter W. L. van de Laar, Thijs de Vries, Bert Entropy (Basel) Article Bayesian state and parameter estimation are automated effectively in a variety of probabilistic programming languages. The process of model comparison on the other hand, which still requires error-prone and time-consuming manual derivations, is often overlooked despite its importance. This paper efficiently automates Bayesian model averaging, selection, and combination by message passing on a Forney-style factor graph with a custom mixture node. Parameter and state inference, and model comparison can then be executed simultaneously using message passing with scale factors. This approach shortens the model design cycle and allows for the straightforward extension to hierarchical and temporal model priors to accommodate for modeling complicated time-varying processes. MDPI 2023-07-29 /pmc/articles/PMC10453220/ /pubmed/37628168 http://dx.doi.org/10.3390/e25081138 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article van Erp, Bart Nuijten, Wouter W. L. van de Laar, Thijs de Vries, Bert Automating Model Comparison in Factor Graphs |
title | Automating Model Comparison in Factor Graphs |
title_full | Automating Model Comparison in Factor Graphs |
title_fullStr | Automating Model Comparison in Factor Graphs |
title_full_unstemmed | Automating Model Comparison in Factor Graphs |
title_short | Automating Model Comparison in Factor Graphs |
title_sort | automating model comparison in factor graphs |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10453220/ https://www.ncbi.nlm.nih.gov/pubmed/37628168 http://dx.doi.org/10.3390/e25081138 |
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