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Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm

The transformer-based U-Net network structure has gained popularity in the field of medical image segmentation. However, most networks overlook the impact of the distance between each patch on the encoding process. This paper proposes a novel GC-TransUnet for medical image segmentation. The key inno...

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Detalles Bibliográficos
Autores principales: Feng, Yuncong, Cong, Yeming, Xing, Shuaijie, Wang, Hairui, Zhao, Cuixing, Zhang, Xiaoli, Yao, Qingan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10453236/
https://www.ncbi.nlm.nih.gov/pubmed/37628199
http://dx.doi.org/10.3390/e25081169
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author Feng, Yuncong
Cong, Yeming
Xing, Shuaijie
Wang, Hairui
Zhao, Cuixing
Zhang, Xiaoli
Yao, Qingan
author_facet Feng, Yuncong
Cong, Yeming
Xing, Shuaijie
Wang, Hairui
Zhao, Cuixing
Zhang, Xiaoli
Yao, Qingan
author_sort Feng, Yuncong
collection PubMed
description The transformer-based U-Net network structure has gained popularity in the field of medical image segmentation. However, most networks overlook the impact of the distance between each patch on the encoding process. This paper proposes a novel GC-TransUnet for medical image segmentation. The key innovation is that it takes into account the relationships between patch blocks based on their distances, optimizing the encoding process in traditional transformer networks. This optimization results in improved encoding efficiency and reduced computational costs. Moreover, the proposed GC-TransUnet is combined with U-Net to accomplish the segmentation task. In the encoder part, the traditional vision transformer is replaced by the global context vision transformer (GC-VIT), eliminating the need for the CNN network while retaining skip connections for subsequent decoders. Experimental results demonstrate that the proposed algorithm achieves superior segmentation results compared to other algorithms when applied to medical images.
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spelling pubmed-104532362023-08-26 Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm Feng, Yuncong Cong, Yeming Xing, Shuaijie Wang, Hairui Zhao, Cuixing Zhang, Xiaoli Yao, Qingan Entropy (Basel) Article The transformer-based U-Net network structure has gained popularity in the field of medical image segmentation. However, most networks overlook the impact of the distance between each patch on the encoding process. This paper proposes a novel GC-TransUnet for medical image segmentation. The key innovation is that it takes into account the relationships between patch blocks based on their distances, optimizing the encoding process in traditional transformer networks. This optimization results in improved encoding efficiency and reduced computational costs. Moreover, the proposed GC-TransUnet is combined with U-Net to accomplish the segmentation task. In the encoder part, the traditional vision transformer is replaced by the global context vision transformer (GC-VIT), eliminating the need for the CNN network while retaining skip connections for subsequent decoders. Experimental results demonstrate that the proposed algorithm achieves superior segmentation results compared to other algorithms when applied to medical images. MDPI 2023-08-05 /pmc/articles/PMC10453236/ /pubmed/37628199 http://dx.doi.org/10.3390/e25081169 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Feng, Yuncong
Cong, Yeming
Xing, Shuaijie
Wang, Hairui
Zhao, Cuixing
Zhang, Xiaoli
Yao, Qingan
Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title_full Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title_fullStr Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title_full_unstemmed Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title_short Distance Matters: A Distance-Aware Medical Image Segmentation Algorithm
title_sort distance matters: a distance-aware medical image segmentation algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10453236/
https://www.ncbi.nlm.nih.gov/pubmed/37628199
http://dx.doi.org/10.3390/e25081169
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AT zhaocuixing distancemattersadistanceawaremedicalimagesegmentationalgorithm
AT zhangxiaoli distancemattersadistanceawaremedicalimagesegmentationalgorithm
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