Cargando…

Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma

The prognosis of low-grade glioma (LGG) is highly variable and requires more accurate predictors. Ferroptosis, a newly discovered programmed cell death, has been demonstrated to play a crucial role in some types of tumors. However, prognostic prediction based on ferroptosis-related genes (FRGs) and...

Descripción completa

Detalles Bibliográficos
Autores principales: Luan, Yuxuan, Chen, Yuling, Wang, Yilin, Shu, Minfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10454415/
https://www.ncbi.nlm.nih.gov/pubmed/37629061
http://dx.doi.org/10.3390/ijms241612880
_version_ 1785096188248195072
author Luan, Yuxuan
Chen, Yuling
Wang, Yilin
Shu, Minfeng
author_facet Luan, Yuxuan
Chen, Yuling
Wang, Yilin
Shu, Minfeng
author_sort Luan, Yuxuan
collection PubMed
description The prognosis of low-grade glioma (LGG) is highly variable and requires more accurate predictors. Ferroptosis, a newly discovered programmed cell death, has been demonstrated to play a crucial role in some types of tumors. However, prognostic prediction based on ferroptosis-related genes (FRGs) and the influence on the tumor microenvironment (TME) in LGG remains elusive. We derived expression profiles for LGG from public databases. Based on the expression of 25 FRGs in LGG, two independent subtypes and a risk model were successfully constructed. Different methods were applied to assess the tumor heterogeneity, tumor microenvironment, and the prognostic value. In addition, a competing endogenous RNA (ceRNA) regulatory axis was constructed. The subtypes had independent tumor heterogeneity, tumor microenvironments, and prognoses. LPCAT3, SLC1A5, HSPA5, and NFE2L2 were identified as the potential prognostic FRGs. Based on these four FRGs, our risk model possesses excellent potential to predict prognosis and varied immune infiltration abundance. The ceRNA regulatory axis provides a potential therapeutic target for LGG. Our molecular subtypes, risk model, and ceRNA regulatory axis have strong immune prediction and prognostic prediction capabilities which could guide LGG treatment.
format Online
Article
Text
id pubmed-10454415
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-104544152023-08-26 Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma Luan, Yuxuan Chen, Yuling Wang, Yilin Shu, Minfeng Int J Mol Sci Article The prognosis of low-grade glioma (LGG) is highly variable and requires more accurate predictors. Ferroptosis, a newly discovered programmed cell death, has been demonstrated to play a crucial role in some types of tumors. However, prognostic prediction based on ferroptosis-related genes (FRGs) and the influence on the tumor microenvironment (TME) in LGG remains elusive. We derived expression profiles for LGG from public databases. Based on the expression of 25 FRGs in LGG, two independent subtypes and a risk model were successfully constructed. Different methods were applied to assess the tumor heterogeneity, tumor microenvironment, and the prognostic value. In addition, a competing endogenous RNA (ceRNA) regulatory axis was constructed. The subtypes had independent tumor heterogeneity, tumor microenvironments, and prognoses. LPCAT3, SLC1A5, HSPA5, and NFE2L2 were identified as the potential prognostic FRGs. Based on these four FRGs, our risk model possesses excellent potential to predict prognosis and varied immune infiltration abundance. The ceRNA regulatory axis provides a potential therapeutic target for LGG. Our molecular subtypes, risk model, and ceRNA regulatory axis have strong immune prediction and prognostic prediction capabilities which could guide LGG treatment. MDPI 2023-08-17 /pmc/articles/PMC10454415/ /pubmed/37629061 http://dx.doi.org/10.3390/ijms241612880 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Luan, Yuxuan
Chen, Yuling
Wang, Yilin
Shu, Minfeng
Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title_full Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title_fullStr Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title_full_unstemmed Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title_short Comprehensive Analysis of Ferroptosis Regulators with Regard to PD-L1 and Immune Infiltration in Low-Grade Glioma
title_sort comprehensive analysis of ferroptosis regulators with regard to pd-l1 and immune infiltration in low-grade glioma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10454415/
https://www.ncbi.nlm.nih.gov/pubmed/37629061
http://dx.doi.org/10.3390/ijms241612880
work_keys_str_mv AT luanyuxuan comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinlowgradeglioma
AT chenyuling comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinlowgradeglioma
AT wangyilin comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinlowgradeglioma
AT shuminfeng comprehensiveanalysisofferroptosisregulatorswithregardtopdl1andimmuneinfiltrationinlowgradeglioma