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Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance
Nitrate transporter 2 (NRT2) proteins play vital roles in both nitrate (NO(3)(−)) uptake and translocation as well as abiotic stress responses in plants. However, little is known about the NRT2 gene family in Brassica rapa. In this study, 14 NRT2s were identified in the B. rapa genome. The BrNRT2 fa...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10454591/ https://www.ncbi.nlm.nih.gov/pubmed/37628616 http://dx.doi.org/10.3390/genes14081564 |
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author | Lv, Bingcan Li, Yifan Wu, Xiaoyu Zhu, Chen Cao, Yunyun Duan, Qiaohong Huang, Jiabao |
author_facet | Lv, Bingcan Li, Yifan Wu, Xiaoyu Zhu, Chen Cao, Yunyun Duan, Qiaohong Huang, Jiabao |
author_sort | Lv, Bingcan |
collection | PubMed |
description | Nitrate transporter 2 (NRT2) proteins play vital roles in both nitrate (NO(3)(−)) uptake and translocation as well as abiotic stress responses in plants. However, little is known about the NRT2 gene family in Brassica rapa. In this study, 14 NRT2s were identified in the B. rapa genome. The BrNRT2 family members contain the PLN00028 and MATE_like superfamily domains. Cis-element analysis indicated that regulatory elements related to stress responses are abundant in the promoter sequences of BrNRT2 genes. BrNRT2.3 expression was increased after drought stress, and BrNRT2.1 and BrNRT2.8 expression were significantly upregulated after salt stress. Furthermore, protein interaction predictions suggested that homologs of BrNRT2.3, BrNRT2.1, and BrNRT2.8 in Arabidopsis thaliana may interact with the known stress-regulating proteins AtNRT1.1, AtNRT1.5, and AtNRT1.8. In conclusion, we suggest that BrNRT2.1, BrNRT2.3, and BrNRT2.8 have the greatest potential for inducing abiotic stress tolerance. Our findings will aid future studies of the biological functions of BrNRT2 family genes. |
format | Online Article Text |
id | pubmed-10454591 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104545912023-08-26 Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance Lv, Bingcan Li, Yifan Wu, Xiaoyu Zhu, Chen Cao, Yunyun Duan, Qiaohong Huang, Jiabao Genes (Basel) Article Nitrate transporter 2 (NRT2) proteins play vital roles in both nitrate (NO(3)(−)) uptake and translocation as well as abiotic stress responses in plants. However, little is known about the NRT2 gene family in Brassica rapa. In this study, 14 NRT2s were identified in the B. rapa genome. The BrNRT2 family members contain the PLN00028 and MATE_like superfamily domains. Cis-element analysis indicated that regulatory elements related to stress responses are abundant in the promoter sequences of BrNRT2 genes. BrNRT2.3 expression was increased after drought stress, and BrNRT2.1 and BrNRT2.8 expression were significantly upregulated after salt stress. Furthermore, protein interaction predictions suggested that homologs of BrNRT2.3, BrNRT2.1, and BrNRT2.8 in Arabidopsis thaliana may interact with the known stress-regulating proteins AtNRT1.1, AtNRT1.5, and AtNRT1.8. In conclusion, we suggest that BrNRT2.1, BrNRT2.3, and BrNRT2.8 have the greatest potential for inducing abiotic stress tolerance. Our findings will aid future studies of the biological functions of BrNRT2 family genes. MDPI 2023-07-31 /pmc/articles/PMC10454591/ /pubmed/37628616 http://dx.doi.org/10.3390/genes14081564 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lv, Bingcan Li, Yifan Wu, Xiaoyu Zhu, Chen Cao, Yunyun Duan, Qiaohong Huang, Jiabao Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title | Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title_full | Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title_fullStr | Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title_full_unstemmed | Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title_short | Brassica rapa Nitrate Transporter 2 (BrNRT2) Family Genes, Identification, and Their Potential Functions in Abiotic Stress Tolerance |
title_sort | brassica rapa nitrate transporter 2 (brnrt2) family genes, identification, and their potential functions in abiotic stress tolerance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10454591/ https://www.ncbi.nlm.nih.gov/pubmed/37628616 http://dx.doi.org/10.3390/genes14081564 |
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