Cargando…

Abundance and Diversification of Repetitive Elements in Decapoda Genomes

Repetitive elements are a major component of DNA sequences due to their ability to propagate through the genome. Characterization of Metazoan repetitive profiles is improving; however, current pipelines fail to identify a significant proportion of divergent repeats in non-model organisms. The Decapo...

Descripción completa

Detalles Bibliográficos
Autores principales:	Rutz, Christelle, Bonassin, Lena, Kress, Arnaud, Francesconi, Caterina, Boštjančić, Ljudevit Luka, Merlat, Dorine, Theissinger, Kathrin, Lecompte, Odile
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10454600/ https://www.ncbi.nlm.nih.gov/pubmed/37628678 http://dx.doi.org/10.3390/genes14081627

Ejemplares similares

Host-pathogen coevolution drives innate immune response to Aphanomyces astaci infection in freshwater crayfish: transcriptomic evidence
por: Boštjančić, Ljudevit Luka, et al.
Publicado: (2022)

Dataset of the de novo assembly and annotation of the marbled crayfish and the noble crayfish hepatopancreas transcriptomes
por: Boštjančić, Ljudevit Luka, et al.
Publicado: (2022)

Novel Approach Combining Transcriptional and Evolutionary Signatures to Identify New Multiciliation Genes
por: Defosset, Audrey, et al.
Publicado: (2021)

New insights into the genetic diversity of the stone crayfish: taxonomic and conservation implications
por: Lovrenčić, Leona, et al.
Publicado: (2020)

The Pontastacus leptodactylus (Astacidae) Repeatome Provides Insight Into Genome Evolution and Reveals Remarkable Diversity of Satellite DNA
por: Boštjančić, Ljudevit Luka, et al.
Publicado: (2021)

Structure and Methylation of 35S rDNA in Allopolyploids Anemone multifida (2n = 4x = 32, BBDD) and Anemone baldensis (2n = 6x = 48, AABBDD) and Their Parental Species Show Evidence of Nucleolar Dominance
por: Mlinarec, Jelena, et al.
Publicado: (2022)

Modulating factors of the abundance and distribution of Achelous spinimanus (Latreille, 1819) (Decapoda, Portunoidea), a fishery resource, in Southeastern Brazil
por: de Sousa, Aline Nonato, et al.
Publicado: (2018)

Identification and characterization of abundant repetitive sequences in Allium cepa
por: Fu, Jiaping, et al.
Publicado: (2019)

Real or fake? Measuring the impact of protein annotation errors on estimates of domain gain and loss events
por: Kress, Arnaud, et al.
Publicado: (2023)

The Evolutionary Dynamics of Repetitive DNA and Its Impact on the Genome Diversification in the Genus Sorghum
por: Kuo, Yi-Tzu, et al.
Publicado: (2021)

Crop diversification and parasitic weed abundance: a global meta-analysis
por: Scott, D., et al.
Publicado: (2022)

Genome size and identification of abundant repetitive sequences in Vallisneria spinulosa
por: Feng, RuiJuan, et al.
Publicado: (2017)

Repetitive DNA in the Architecture, Repatterning, and Diversification of the Genome of Aegilops speltoides Tausch (Poaceae, Triticeae)
por: Pollak, Yulia, et al.
Publicado: (2018)

Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis
por: Santos da Silva, Kevin, et al.
Publicado: (2022)

Chromosomal Diversification in Pseudacanthicus Species (Loricariidae, Hypostominae) Revealed by Comparative Mapping of Repetitive Sequences
por: Santos da Silva, Kevin, et al.
Publicado: (2022)

Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
por: Santos da Silva, Kevin, et al.
Publicado: (2023)

The complete mitogenome of Pentacheles validus (Decapoda: Polychelidae)
por: Shi, Xiaofeng, et al.
Publicado: (2018)

Detection of the endangered European weather loach (Misgurnus fossilis) via water and sediment samples: Testing multiple eDNA workflows
por: Kusanke, Lena Maureen, et al.
Publicado: (2020)

Dissecting the Genomic Diversification of Late Embryogenesis Abundant (LEA) Protein Gene Families in Plants
por: Artur, Mariana Aline Silva, et al.
Publicado: (2018)

Low temperatures lead to higher toxicity of the fungicide folpet to larval stages of Rana temporaria and Bufotes viridis
por: Leeb, Christoph, et al.
Publicado: (2022)

The complete mitochondrial genome of Metapenaeopsis mogiensis (Decapoda: Penaeidae)
por: Zhong, Shengping, et al.
Publicado: (2018)

The complete mitochondrial genome of Thor amboinensis (Hippolytidae, Decapoda)
por: Wang, Yan, et al.
Publicado: (2020)

Complete mitochondrial genome of Leptodius sanguineus (Decapoda, Xanthidae)
por: Sung, Jin-Mo, et al.
Publicado: (2016)

The complete mitochondrial genome of Thalamita sima (Decapoda: Portunidae)
por: Zhong, Shengping, et al.
Publicado: (2018)

The complete mitochondrial genome of Scylla paramamosain (Decapoda: Portunidae)
por: Zhong, Shengping, et al.
Publicado: (2017)

The complete mitochondrial genome of Penaeus semisulcatus (Decapoda: Penaeidae)
por: Zhong, Shengping, et al.
Publicado: (2019)

The complete mitochondrial genome of Parapenaeopsis hungerfordi (Decapoda: Penaeidae)
por: Zhong, Shengping, et al.
Publicado: (2018)

Identification and characterization of abundant repetitive sequences in Eragrostis tef cv. Enatite genome
por: Gebre, Yohannes Gedamu, et al.
Publicado: (2016)

Amphibian population genetics in agricultural landscapes: does viniculture drive the population structuring of the European common frog (Rana temporaria)?
por: Lenhardt, Patrick P., et al.
Publicado: (2017)

Phylogeny and Evolutionary Patterns in the Dwarf Crayfish Subfamily (Decapoda: Cambarellinae)
por: Pedraza-Lara, Carlos, et al.
Publicado: (2012)

Comparative mitogenomics of the Decapoda reveals evolutionary heterogeneity in architecture and composition
por: Tan, Mun Hua, et al.
Publicado: (2019)

The complete mitogenome of Caridina indistincta ‘sp. A’ (Decapoda: Atyidae)
por: Schmidt, Daniel J.
Publicado: (2018)

The complete mitochondrial genome of Chionoecetes japonicus (Crustacea: Decapoda: Majoidea)
por: Kim, Yong Hwi, et al.
Publicado: (2020)

The complete mitochondrial genome of Belzebub intermedius (Decapoda, Dendrobranchiata, Luciferidae)
por: Ju, Seong-Yun, et al.
Publicado: (2018)

The complete mitochondrial genome of Hymenocera picta (Malacostraca: Decapoda: Hymenoceridae)
por: Sung, Chia-Hsuan, et al.
Publicado: (2018)

Characterization of the complete mitochondrial genome of Lysmata debelius (Decapoda: Hippolytidae)
por: Chen, Jinhui, et al.
Publicado: (2021)

Characterization of the complete mitochondrial genome of Lysmata vittata (Decapoda: Hippolytidae)
por: Chen, Jinhui, et al.
Publicado: (2021)

Proteome-Scale Detection of Differential Conservation Patterns at Protein and Subprotein Levels with BLUR
por: Defosset, Audrey, et al.
Publicado: (2020)

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria
por: Saw, Jimmy H. W., et al.
Publicado: (2020)

The biogeography of the yeti crabs (Kiwaidae) with notes on the phylogeny of the Chirostyloidea (Decapoda: Anomura)
por: Roterman, C. N., et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_k5a5tp2bhpu4o4s0uj2m1en4ul