Cargando…

Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi

Plant biomass is one of the most abundant renewable carbon sources, which holds great potential for replacing current fossil-based production of fuels and chemicals. In nature, fungi can efficiently degrade plant polysaccharides by secreting a broad range of carbohydrate-active enzymes (CAZymes), su...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Jiajia, Wiebenga, Ad, Lipzen, Anna, Ng, Vivian, Tejomurthula, Sravanthi, Zhang, Yu, Grigoriev, Igor V., Peng, Mao, de Vries, Ronald P.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10455118/ https://www.ncbi.nlm.nih.gov/pubmed/37623631 http://dx.doi.org/10.3390/jof9080860

Ejemplares similares

The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum
por: Li, Jiajia, et al.
Publicado: (2022)

Macroalgae Derived Fungi Have High Abilities to Degrade Algal Polymers
por: Patyshakuliyeva, Aleksandrina, et al.
Publicado: (2019)

Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
por: Khosravi, Claire, et al.
Publicado: (2019)

Regulators of plant biomass degradation in ascomycetous fungi
por: Benocci, Tiziano, et al.
Publicado: (2017)

Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
por: Miyauchi, Shingo, et al.
Publicado: (2016)

Closely related fungi employ diverse enzymatic strategies to degrade plant biomass
por: Benoit, Isabelle, et al.
Publicado: (2015)

Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli
por: Mäkelä, M.R., et al.
Publicado: (2018)

Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
por: Hagestad, Ole Christian, et al.
Publicado: (2021)

Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation
por: Young, Darcy, et al.
Publicado: (2015)

Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus niger
por: Garrigues, Sandra, et al.
Publicado: (2022)

Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
por: Benocci, Tiziano, et al.
Publicado: (2019)

Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales)
por: Urquhart, Andrew S., et al.
Publicado: (2018)

Omics analyses and biochemical study of Phlebiopsis gigantea elucidate its degradation strategy of wood extractives
por: Iwata, Mana, et al.
Publicado: (2021)

Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi
por: Reynolds, Nicole K, et al.
Publicado: (2023)

The Amylolytic Regulator AmyR of Aspergillus niger Is Involved in Sucrose and Inulin Utilization in a Culture-Condition-Dependent Manner
por: Kun, Roland S., et al.
Publicado: (2023)

Divergent Evolution of Early Terrestrial Fungi Reveals the Evolution of Mucormycosis Pathogenicity Factors
por: Wang, Yan, et al.
Publicado: (2023)

CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
por: Peng, Mao, et al.
Publicado: (2021)

Quantitative comparison of the biomass-degrading enzyme repertoires of five filamentous fungi
por: Arntzen, Magnus Ø., et al.
Publicado: (2020)

Evidence for Lignocellulose-Decomposing Enzymes in the Genome and Transcriptome of the Aquatic Hyphomycete Clavariopsis aquatica
por: Heeger, Felix, et al.
Publicado: (2021)

Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level
por: Battaglia, Evy, et al.
Publicado: (2011)

Cinnamic Acid and Sorbic acid Conversion Are Mediated by the Same Transcriptional Regulator in Aspergillus niger
por: Lubbers, Ronnie J. M., et al.
Publicado: (2019)

Penicillium echinulatum secretome analysis reveals the fungi potential for degradation of lignocellulosic biomass
por: Schneider, Willian Daniel Hahn, et al.
Publicado: (2016)

Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity
por: Chroumpi, Tania, et al.
Publicado: (2021)

Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi
por: Mondo, Stephen J., et al.
Publicado: (2017)

Thermotolerant and mesophylic fungi from sugarcane bagasse and their prospection for biomass-degrading enzyme production
por: dos Santos, Bruna Silveira Lamanes, et al.
Publicado: (2015)

GalR, GalX and AraR co‐regulate d‐galactose and l‐arabinose utilization in Aspergillus nidulans
por: Meng, Jiali, et al.
Publicado: (2022)

Annotated Genome Sequence of the High-Biomass-Producing Yellow-Green Alga Tribonema minus
por: Mahan, Kristina M., et al.
Publicado: (2021)

Resolution of deep divergence of club fungi (phylum Basidiomycota)
por: Mao, Hongliang, et al.
Publicado: (2019)

Early Diverging Insect-Pathogenic Fungi of the Order Entomophthorales Possess Diverse and Unique Subtilisin-Like Serine Proteases
por: Arnesen, Jonathan A., et al.
Publicado: (2018)

Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates
por: Jiménez, Diego Javier, et al.
Publicado: (2017)

The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds
por: Kowalczyk, Joanna E., et al.
Publicado: (2019)

Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
por: Suzuki, Hitoshi, et al.
Publicado: (2012)

Genetic Interaction of Aspergillus nidulans galR, xlnR and araR in Regulating D-Galactose and L-Arabinose Release and Catabolism Gene Expression
por: Kowalczyk, Joanna E., et al.
Publicado: (2015)

Draft Genome Sequences of Three Monokaryotic Isolates of the White-Rot Basidiomycete Fungus Dichomitus squalens
por: Casado López, Sara, et al.
Publicado: (2019)

Enzymes of early-diverging, zoosporic fungi
por: Lange, Lene, et al.
Publicado: (2019)

Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses
por: Myers, J. M., et al.
Publicado: (2020)

Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis
por: Freyria, Nastasia J., et al.
Publicado: (2022)

Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus
por: Mujic, Alija Bajro, et al.
Publicado: (2017)

Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
por: Kourist, Robert, et al.
Publicado: (2015)

Transcriptomics of Temporal- versus Substrate-Specific Wood Decay in the Brown-Rot Fungus Fibroporia radiculosa
por: Min, Byoungnam, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_r0o14kp2mk4spc018bd4e8pg9g