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The Progression in Developing Genomic Resources for Crop Improvement

Sequencing technologies have rapidly evolved over the past two decades, and new technologies are being continually developed and commercialized. The emerging sequencing technologies target generating more data with fewer inputs and at lower costs. This has also translated to an increase in the numbe...

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Autores principales: Ruperao, Pradeep, Rangan, Parimalan, Shah, Trushar, Thakur, Vivek, Kalia, Sanjay, Mayes, Sean, Rathore, Abhishek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10455509/
https://www.ncbi.nlm.nih.gov/pubmed/37629524
http://dx.doi.org/10.3390/life13081668
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author Ruperao, Pradeep
Rangan, Parimalan
Shah, Trushar
Thakur, Vivek
Kalia, Sanjay
Mayes, Sean
Rathore, Abhishek
author_facet Ruperao, Pradeep
Rangan, Parimalan
Shah, Trushar
Thakur, Vivek
Kalia, Sanjay
Mayes, Sean
Rathore, Abhishek
author_sort Ruperao, Pradeep
collection PubMed
description Sequencing technologies have rapidly evolved over the past two decades, and new technologies are being continually developed and commercialized. The emerging sequencing technologies target generating more data with fewer inputs and at lower costs. This has also translated to an increase in the number and type of corresponding applications in genomics besides enhanced computational capacities (both hardware and software). Alongside the evolving DNA sequencing landscape, bioinformatics research teams have also evolved to accommodate the increasingly demanding techniques used to combine and interpret data, leading to many researchers moving from the lab to the computer. The rich history of DNA sequencing has paved the way for new insights and the development of new analysis methods. Understanding and learning from past technologies can help with the progress of future applications. This review focuses on the evolution of sequencing technologies, their significant enabling role in generating plant genome assemblies and downstream applications, and the parallel development of bioinformatics tools and skills, filling the gap in data analysis techniques.
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spelling pubmed-104555092023-08-26 The Progression in Developing Genomic Resources for Crop Improvement Ruperao, Pradeep Rangan, Parimalan Shah, Trushar Thakur, Vivek Kalia, Sanjay Mayes, Sean Rathore, Abhishek Life (Basel) Review Sequencing technologies have rapidly evolved over the past two decades, and new technologies are being continually developed and commercialized. The emerging sequencing technologies target generating more data with fewer inputs and at lower costs. This has also translated to an increase in the number and type of corresponding applications in genomics besides enhanced computational capacities (both hardware and software). Alongside the evolving DNA sequencing landscape, bioinformatics research teams have also evolved to accommodate the increasingly demanding techniques used to combine and interpret data, leading to many researchers moving from the lab to the computer. The rich history of DNA sequencing has paved the way for new insights and the development of new analysis methods. Understanding and learning from past technologies can help with the progress of future applications. This review focuses on the evolution of sequencing technologies, their significant enabling role in generating plant genome assemblies and downstream applications, and the parallel development of bioinformatics tools and skills, filling the gap in data analysis techniques. MDPI 2023-07-31 /pmc/articles/PMC10455509/ /pubmed/37629524 http://dx.doi.org/10.3390/life13081668 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Ruperao, Pradeep
Rangan, Parimalan
Shah, Trushar
Thakur, Vivek
Kalia, Sanjay
Mayes, Sean
Rathore, Abhishek
The Progression in Developing Genomic Resources for Crop Improvement
title The Progression in Developing Genomic Resources for Crop Improvement
title_full The Progression in Developing Genomic Resources for Crop Improvement
title_fullStr The Progression in Developing Genomic Resources for Crop Improvement
title_full_unstemmed The Progression in Developing Genomic Resources for Crop Improvement
title_short The Progression in Developing Genomic Resources for Crop Improvement
title_sort progression in developing genomic resources for crop improvement
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10455509/
https://www.ncbi.nlm.nih.gov/pubmed/37629524
http://dx.doi.org/10.3390/life13081668
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