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Efficient Photoacoustic Image Synthesis with Deep Learning

Photoacoustic imaging potentially allows for the real-time visualization of functional human tissue parameters such as oxygenation but is subject to a challenging underlying quantification problem. While in silico studies have revealed the great potential of deep learning (DL) methodology in solving...

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Autores principales: Rix, Tom, Dreher, Kris K., Nölke, Jan-Hinrich, Schellenberg, Melanie, Tizabi, Minu D., Seitel, Alexander, Maier-Hein, Lena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10457787/
https://www.ncbi.nlm.nih.gov/pubmed/37631628
http://dx.doi.org/10.3390/s23167085
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author Rix, Tom
Dreher, Kris K.
Nölke, Jan-Hinrich
Schellenberg, Melanie
Tizabi, Minu D.
Seitel, Alexander
Maier-Hein, Lena
author_facet Rix, Tom
Dreher, Kris K.
Nölke, Jan-Hinrich
Schellenberg, Melanie
Tizabi, Minu D.
Seitel, Alexander
Maier-Hein, Lena
author_sort Rix, Tom
collection PubMed
description Photoacoustic imaging potentially allows for the real-time visualization of functional human tissue parameters such as oxygenation but is subject to a challenging underlying quantification problem. While in silico studies have revealed the great potential of deep learning (DL) methodology in solving this problem, the inherent lack of an efficient gold standard method for model training and validation remains a grand challenge. This work investigates whether DL can be leveraged to accurately and efficiently simulate photon propagation in biological tissue, enabling photoacoustic image synthesis. Our approach is based on estimating the initial pressure distribution of the photoacoustic waves from the underlying optical properties using a back-propagatable neural network trained on synthetic data. In proof-of-concept studies, we validated the performance of two complementary neural network architectures, namely a conventional U-Net-like model and a Fourier Neural Operator (FNO) network. Our in silico validation on multispectral human forearm images shows that DL methods can speed up image generation by a factor of 100 when compared to Monte Carlo simulations with [Formula: see text] photons. While the FNO is slightly more accurate than the U-Net, when compared to Monte Carlo simulations performed with a reduced number of photons ([Formula: see text]), both neural network architectures achieve equivalent accuracy. In contrast to Monte Carlo simulations, the proposed DL models can be used as inherently differentiable surrogate models in the photoacoustic image synthesis pipeline, allowing for back-propagation of the synthesis error and gradient-based optimization over the entire pipeline. Due to their efficiency, they have the potential to enable large-scale training data generation that can expedite the clinical application of photoacoustic imaging.
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spelling pubmed-104577872023-08-27 Efficient Photoacoustic Image Synthesis with Deep Learning Rix, Tom Dreher, Kris K. Nölke, Jan-Hinrich Schellenberg, Melanie Tizabi, Minu D. Seitel, Alexander Maier-Hein, Lena Sensors (Basel) Article Photoacoustic imaging potentially allows for the real-time visualization of functional human tissue parameters such as oxygenation but is subject to a challenging underlying quantification problem. While in silico studies have revealed the great potential of deep learning (DL) methodology in solving this problem, the inherent lack of an efficient gold standard method for model training and validation remains a grand challenge. This work investigates whether DL can be leveraged to accurately and efficiently simulate photon propagation in biological tissue, enabling photoacoustic image synthesis. Our approach is based on estimating the initial pressure distribution of the photoacoustic waves from the underlying optical properties using a back-propagatable neural network trained on synthetic data. In proof-of-concept studies, we validated the performance of two complementary neural network architectures, namely a conventional U-Net-like model and a Fourier Neural Operator (FNO) network. Our in silico validation on multispectral human forearm images shows that DL methods can speed up image generation by a factor of 100 when compared to Monte Carlo simulations with [Formula: see text] photons. While the FNO is slightly more accurate than the U-Net, when compared to Monte Carlo simulations performed with a reduced number of photons ([Formula: see text]), both neural network architectures achieve equivalent accuracy. In contrast to Monte Carlo simulations, the proposed DL models can be used as inherently differentiable surrogate models in the photoacoustic image synthesis pipeline, allowing for back-propagation of the synthesis error and gradient-based optimization over the entire pipeline. Due to their efficiency, they have the potential to enable large-scale training data generation that can expedite the clinical application of photoacoustic imaging. MDPI 2023-08-10 /pmc/articles/PMC10457787/ /pubmed/37631628 http://dx.doi.org/10.3390/s23167085 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rix, Tom
Dreher, Kris K.
Nölke, Jan-Hinrich
Schellenberg, Melanie
Tizabi, Minu D.
Seitel, Alexander
Maier-Hein, Lena
Efficient Photoacoustic Image Synthesis with Deep Learning
title Efficient Photoacoustic Image Synthesis with Deep Learning
title_full Efficient Photoacoustic Image Synthesis with Deep Learning
title_fullStr Efficient Photoacoustic Image Synthesis with Deep Learning
title_full_unstemmed Efficient Photoacoustic Image Synthesis with Deep Learning
title_short Efficient Photoacoustic Image Synthesis with Deep Learning
title_sort efficient photoacoustic image synthesis with deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10457787/
https://www.ncbi.nlm.nih.gov/pubmed/37631628
http://dx.doi.org/10.3390/s23167085
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