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Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022

African swine fever (ASF), a viral disease caused by the African swine fever virus (ASFV), is associated with high mortality rates in domestic pigs and wild boars. ASF has been spreading since its discovery in wild boars in Korea in October 2019. Genomic analyses have provided insights into the gene...

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Autores principales: Kim, Garam, Kim, So-Jeong, Kim, Won-Jun, Kim, Jung-Hyeuk, Kim, Ji-Chul, Lee, Sang-Geon, Kim, Eun-Sol, Lee, Sang-Hyun, Jheong, Weon-Hwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10459476/
https://www.ncbi.nlm.nih.gov/pubmed/37632010
http://dx.doi.org/10.3390/v15081667
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author Kim, Garam
Kim, So-Jeong
Kim, Won-Jun
Kim, Jung-Hyeuk
Kim, Ji-Chul
Lee, Sang-Geon
Kim, Eun-Sol
Lee, Sang-Hyun
Jheong, Weon-Hwa
author_facet Kim, Garam
Kim, So-Jeong
Kim, Won-Jun
Kim, Jung-Hyeuk
Kim, Ji-Chul
Lee, Sang-Geon
Kim, Eun-Sol
Lee, Sang-Hyun
Jheong, Weon-Hwa
author_sort Kim, Garam
collection PubMed
description African swine fever (ASF), a viral disease caused by the African swine fever virus (ASFV), is associated with high mortality rates in domestic pigs and wild boars. ASF has been spreading since its discovery in wild boars in Korea in October 2019. Genomic analyses have provided insights into the genetic diversity of the ASFV isolated from various regions, enabling a better understanding of the virus origin and transmission patterns. We conducted a genome analysis to evaluate the diversity and mutations of ASFV spreading among wild boars in Korea during 2019–2022. We compared the genomes of ASFV strains isolated from Korean wild boars and publicly available ASFV genomes. Genomic analysis revealed several single-nucleotide polymorphisms within multigene families (MGFs) 360-1La and 360-4L in Korean ASFV. MGF 360-1La and 360-4L variations were not observed in other ASFV strains, including those of genotype II. Finally, we partially analyzed MGFs 360-1La and 360-4L in ASFV-positive samples between 2019 and 2022, confirming the geographical distribution of the variants. Our findings can help identify new genetic markers for epidemiological ASFV analysis and provide essential information for effective disease management.
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spelling pubmed-104594762023-08-27 Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022 Kim, Garam Kim, So-Jeong Kim, Won-Jun Kim, Jung-Hyeuk Kim, Ji-Chul Lee, Sang-Geon Kim, Eun-Sol Lee, Sang-Hyun Jheong, Weon-Hwa Viruses Article African swine fever (ASF), a viral disease caused by the African swine fever virus (ASFV), is associated with high mortality rates in domestic pigs and wild boars. ASF has been spreading since its discovery in wild boars in Korea in October 2019. Genomic analyses have provided insights into the genetic diversity of the ASFV isolated from various regions, enabling a better understanding of the virus origin and transmission patterns. We conducted a genome analysis to evaluate the diversity and mutations of ASFV spreading among wild boars in Korea during 2019–2022. We compared the genomes of ASFV strains isolated from Korean wild boars and publicly available ASFV genomes. Genomic analysis revealed several single-nucleotide polymorphisms within multigene families (MGFs) 360-1La and 360-4L in Korean ASFV. MGF 360-1La and 360-4L variations were not observed in other ASFV strains, including those of genotype II. Finally, we partially analyzed MGFs 360-1La and 360-4L in ASFV-positive samples between 2019 and 2022, confirming the geographical distribution of the variants. Our findings can help identify new genetic markers for epidemiological ASFV analysis and provide essential information for effective disease management. MDPI 2023-07-31 /pmc/articles/PMC10459476/ /pubmed/37632010 http://dx.doi.org/10.3390/v15081667 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kim, Garam
Kim, So-Jeong
Kim, Won-Jun
Kim, Jung-Hyeuk
Kim, Ji-Chul
Lee, Sang-Geon
Kim, Eun-Sol
Lee, Sang-Hyun
Jheong, Weon-Hwa
Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title_full Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title_fullStr Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title_full_unstemmed Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title_short Emergence and Prevalence of an African Swine Fever Virus Variant in Wild Boar Populations in South Korea from 2019 to 2022
title_sort emergence and prevalence of an african swine fever virus variant in wild boar populations in south korea from 2019 to 2022
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10459476/
https://www.ncbi.nlm.nih.gov/pubmed/37632010
http://dx.doi.org/10.3390/v15081667
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