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Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species

The efficient analyses of sound recordings obtained through passive acoustic monitoring (PAM) might be challenging owing to the vast amount of data collected using such technique. The development of species-specific acoustic recognizers (e.g., through deep learning) may alleviate the time required f...

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Autores principales: Bota, Gerard, Manzano-Rubio, Robert, Catalán, Lidia, Gómez-Catasús, Julia, Pérez-Granados, Cristian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10459908/
https://www.ncbi.nlm.nih.gov/pubmed/37631713
http://dx.doi.org/10.3390/s23167176
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author Bota, Gerard
Manzano-Rubio, Robert
Catalán, Lidia
Gómez-Catasús, Julia
Pérez-Granados, Cristian
author_facet Bota, Gerard
Manzano-Rubio, Robert
Catalán, Lidia
Gómez-Catasús, Julia
Pérez-Granados, Cristian
author_sort Bota, Gerard
collection PubMed
description The efficient analyses of sound recordings obtained through passive acoustic monitoring (PAM) might be challenging owing to the vast amount of data collected using such technique. The development of species-specific acoustic recognizers (e.g., through deep learning) may alleviate the time required for sound recordings but are often difficult to create. Here, we evaluate the effectiveness of BirdNET, a new machine learning tool freely available for automated recognition and acoustic data processing, for correctly identifying and detecting two cryptic forest bird species. BirdNET precision was high for both the Coal Tit (Peripatus ater) and the Short-toed Treecreeper (Certhia brachydactyla), with mean values of 92.6% and 87.8%, respectively. Using the default values, BirdNET successfully detected the Coal Tit and the Short-toed Treecreeper in 90.5% and 98.4% of the annotated recordings, respectively. We also tested the impact of variable confidence scores on BirdNET performance and estimated the optimal confidence score for each species. Vocal activity patterns of both species, obtained using PAM and BirdNET, reached their peak during the first two hours after sunrise. We hope that our study may encourage researchers and managers to utilize this user-friendly and ready-to-use software, thus contributing to advancements in acoustic sensing and environmental monitoring.
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spelling pubmed-104599082023-08-27 Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species Bota, Gerard Manzano-Rubio, Robert Catalán, Lidia Gómez-Catasús, Julia Pérez-Granados, Cristian Sensors (Basel) Article The efficient analyses of sound recordings obtained through passive acoustic monitoring (PAM) might be challenging owing to the vast amount of data collected using such technique. The development of species-specific acoustic recognizers (e.g., through deep learning) may alleviate the time required for sound recordings but are often difficult to create. Here, we evaluate the effectiveness of BirdNET, a new machine learning tool freely available for automated recognition and acoustic data processing, for correctly identifying and detecting two cryptic forest bird species. BirdNET precision was high for both the Coal Tit (Peripatus ater) and the Short-toed Treecreeper (Certhia brachydactyla), with mean values of 92.6% and 87.8%, respectively. Using the default values, BirdNET successfully detected the Coal Tit and the Short-toed Treecreeper in 90.5% and 98.4% of the annotated recordings, respectively. We also tested the impact of variable confidence scores on BirdNET performance and estimated the optimal confidence score for each species. Vocal activity patterns of both species, obtained using PAM and BirdNET, reached their peak during the first two hours after sunrise. We hope that our study may encourage researchers and managers to utilize this user-friendly and ready-to-use software, thus contributing to advancements in acoustic sensing and environmental monitoring. MDPI 2023-08-15 /pmc/articles/PMC10459908/ /pubmed/37631713 http://dx.doi.org/10.3390/s23167176 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bota, Gerard
Manzano-Rubio, Robert
Catalán, Lidia
Gómez-Catasús, Julia
Pérez-Granados, Cristian
Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title_full Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title_fullStr Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title_full_unstemmed Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title_short Hearing to the Unseen: AudioMoth and BirdNET as a Cheap and Easy Method for Monitoring Cryptic Bird Species
title_sort hearing to the unseen: audiomoth and birdnet as a cheap and easy method for monitoring cryptic bird species
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10459908/
https://www.ncbi.nlm.nih.gov/pubmed/37631713
http://dx.doi.org/10.3390/s23167176
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