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Neural encoding with unsupervised spiking convolutional neural network

Accurately predicting the brain responses to various stimuli poses a significant challenge in neuroscience. Despite recent breakthroughs in neural encoding using convolutional neural networks (CNNs) in fMRI studies, there remain critical gaps between the computational rules of traditional artificial...

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Autores principales: Wang, Chong, Yan, Hongmei, Huang, Wei, Sheng, Wei, Wang, Yuting, Fan, Yun-Shuang, Liu, Tao, Zou, Ting, Li, Rong, Chen, Huafu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10462614/
https://www.ncbi.nlm.nih.gov/pubmed/37640808
http://dx.doi.org/10.1038/s42003-023-05257-4
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author Wang, Chong
Yan, Hongmei
Huang, Wei
Sheng, Wei
Wang, Yuting
Fan, Yun-Shuang
Liu, Tao
Zou, Ting
Li, Rong
Chen, Huafu
author_facet Wang, Chong
Yan, Hongmei
Huang, Wei
Sheng, Wei
Wang, Yuting
Fan, Yun-Shuang
Liu, Tao
Zou, Ting
Li, Rong
Chen, Huafu
author_sort Wang, Chong
collection PubMed
description Accurately predicting the brain responses to various stimuli poses a significant challenge in neuroscience. Despite recent breakthroughs in neural encoding using convolutional neural networks (CNNs) in fMRI studies, there remain critical gaps between the computational rules of traditional artificial neurons and real biological neurons. To address this issue, a spiking CNN (SCNN)-based framework is presented in this study to achieve neural encoding in a more biologically plausible manner. The framework utilizes unsupervised SCNN to extract visual features of image stimuli and employs a receptive field-based regression algorithm to predict fMRI responses from the SCNN features. Experimental results on handwritten characters, handwritten digits and natural images demonstrate that the proposed approach can achieve remarkably good encoding performance and can be utilized for “brain reading” tasks such as image reconstruction and identification. This work suggests that SNN can serve as a promising tool for neural encoding.
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spelling pubmed-104626142023-08-30 Neural encoding with unsupervised spiking convolutional neural network Wang, Chong Yan, Hongmei Huang, Wei Sheng, Wei Wang, Yuting Fan, Yun-Shuang Liu, Tao Zou, Ting Li, Rong Chen, Huafu Commun Biol Article Accurately predicting the brain responses to various stimuli poses a significant challenge in neuroscience. Despite recent breakthroughs in neural encoding using convolutional neural networks (CNNs) in fMRI studies, there remain critical gaps between the computational rules of traditional artificial neurons and real biological neurons. To address this issue, a spiking CNN (SCNN)-based framework is presented in this study to achieve neural encoding in a more biologically plausible manner. The framework utilizes unsupervised SCNN to extract visual features of image stimuli and employs a receptive field-based regression algorithm to predict fMRI responses from the SCNN features. Experimental results on handwritten characters, handwritten digits and natural images demonstrate that the proposed approach can achieve remarkably good encoding performance and can be utilized for “brain reading” tasks such as image reconstruction and identification. This work suggests that SNN can serve as a promising tool for neural encoding. Nature Publishing Group UK 2023-08-28 /pmc/articles/PMC10462614/ /pubmed/37640808 http://dx.doi.org/10.1038/s42003-023-05257-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wang, Chong
Yan, Hongmei
Huang, Wei
Sheng, Wei
Wang, Yuting
Fan, Yun-Shuang
Liu, Tao
Zou, Ting
Li, Rong
Chen, Huafu
Neural encoding with unsupervised spiking convolutional neural network
title Neural encoding with unsupervised spiking convolutional neural network
title_full Neural encoding with unsupervised spiking convolutional neural network
title_fullStr Neural encoding with unsupervised spiking convolutional neural network
title_full_unstemmed Neural encoding with unsupervised spiking convolutional neural network
title_short Neural encoding with unsupervised spiking convolutional neural network
title_sort neural encoding with unsupervised spiking convolutional neural network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10462614/
https://www.ncbi.nlm.nih.gov/pubmed/37640808
http://dx.doi.org/10.1038/s42003-023-05257-4
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