Cargando…

Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion

Ethnopharmacological relevance: Salidroside (SAL), a phenolic natural product present in Rhodiola rosea, are commonly used in the treatment of various ischemic-hypoxic diseases, including intestinal ischemia–reperfusion (IR) injury. However, their efficacy and potential mechanisms in the treatment o...

Descripción completa

Detalles Bibliográficos
Autores principales: Chen, Feng, Chai, Yi-hong, Zhang, Fa, Liu, Yong-qiang, Zhang, Yan, Shi, Ya-jing, Zhang, Jian-ming, Leng, Yu-fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10462912/
https://www.ncbi.nlm.nih.gov/pubmed/37530723
http://dx.doi.org/10.1042/BSR20230539
_version_ 1785098138903642112
author Chen, Feng
Chai, Yi-hong
Zhang, Fa
Liu, Yong-qiang
Zhang, Yan
Shi, Ya-jing
Zhang, Jian-ming
Leng, Yu-fang
author_facet Chen, Feng
Chai, Yi-hong
Zhang, Fa
Liu, Yong-qiang
Zhang, Yan
Shi, Ya-jing
Zhang, Jian-ming
Leng, Yu-fang
author_sort Chen, Feng
collection PubMed
description Ethnopharmacological relevance: Salidroside (SAL), a phenolic natural product present in Rhodiola rosea, are commonly used in the treatment of various ischemic-hypoxic diseases, including intestinal ischemia–reperfusion (IR) injury. However, their efficacy and potential mechanisms in the treatment of intestinal IR injury have not been investigated. Objective: The objective of the present study is to investigate the pharmacological mechanism of action of SAL on intestinal IR injury using a network pharmacology approach combined with experimental validation. Methods: In the present study, we used the Traditional Chinese Medicine Systematic Pharmacology (TCMSP) database and analysis platform and Comparative Toxicogenomics Database (CTD) to predict possible target genes of SAL, collected relevant target genes of intestinal IR injury from GeneCards and DisGenet websites, and collected summary data to screen common target genes. Then, the protein–protein interaction (PPI) target network was constructed and analyzed by STRING database and Cytoscape 3.8.2 with the above intersecting genes. Then, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed and the component-target-pathway network was constructed, followed by the use of molecular docking and molecular dynamic simulation to verify the possible binding conformation between SAL and candidate targets to further explore the potential targets of SAL in the treatment of intestinal IR injury. Finally, an in vivo model of mouse superior mesenteric artery ligation was established to assess the anti-intestinal IR injury effect of SAL by assessing histopathological changes in mouse small intestine by HE staining, detecting inflammatory factor expression by ELISA kit, and detecting the expression of key protein targets by Western blotting. Results: A total of 166 SAL target genes and 1740 disease-related targets were retrieved, and 88 overlapping proteins were obtained as potential therapeutic targets. The pathway enrichment analysis revealed that the pharmacological effects of SAL on intestinal IR injury were anti-hypoxic, anti-inflammatory and metabolic pathway related, and the molecular docking and molecular dynamic simulation results showed that the core bioactive components had good binding affinity for TXNIP and AMPK, and the immunoblotting results indicated that the expression levels of TXNIP and AMPK in the small intestinal tissues of mice in the drug-treated group compared with the model group were significantly changed. Conclusion: SAL may target AMPK and TXNIP domains to act as a therapeutic agent for intestinal IR. These findings comprehensively reveal the potential therapeutic targets for SAL against intestinal IR and provide theoretical basis for the clinical application of SAL in the treatment of intestinal IR.
format Online
Article
Text
id pubmed-10462912
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Portland Press Ltd.
record_format MEDLINE/PubMed
spelling pubmed-104629122023-08-30 Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion Chen, Feng Chai, Yi-hong Zhang, Fa Liu, Yong-qiang Zhang, Yan Shi, Ya-jing Zhang, Jian-ming Leng, Yu-fang Biosci Rep Cell Death & Injury Ethnopharmacological relevance: Salidroside (SAL), a phenolic natural product present in Rhodiola rosea, are commonly used in the treatment of various ischemic-hypoxic diseases, including intestinal ischemia–reperfusion (IR) injury. However, their efficacy and potential mechanisms in the treatment of intestinal IR injury have not been investigated. Objective: The objective of the present study is to investigate the pharmacological mechanism of action of SAL on intestinal IR injury using a network pharmacology approach combined with experimental validation. Methods: In the present study, we used the Traditional Chinese Medicine Systematic Pharmacology (TCMSP) database and analysis platform and Comparative Toxicogenomics Database (CTD) to predict possible target genes of SAL, collected relevant target genes of intestinal IR injury from GeneCards and DisGenet websites, and collected summary data to screen common target genes. Then, the protein–protein interaction (PPI) target network was constructed and analyzed by STRING database and Cytoscape 3.8.2 with the above intersecting genes. Then, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed and the component-target-pathway network was constructed, followed by the use of molecular docking and molecular dynamic simulation to verify the possible binding conformation between SAL and candidate targets to further explore the potential targets of SAL in the treatment of intestinal IR injury. Finally, an in vivo model of mouse superior mesenteric artery ligation was established to assess the anti-intestinal IR injury effect of SAL by assessing histopathological changes in mouse small intestine by HE staining, detecting inflammatory factor expression by ELISA kit, and detecting the expression of key protein targets by Western blotting. Results: A total of 166 SAL target genes and 1740 disease-related targets were retrieved, and 88 overlapping proteins were obtained as potential therapeutic targets. The pathway enrichment analysis revealed that the pharmacological effects of SAL on intestinal IR injury were anti-hypoxic, anti-inflammatory and metabolic pathway related, and the molecular docking and molecular dynamic simulation results showed that the core bioactive components had good binding affinity for TXNIP and AMPK, and the immunoblotting results indicated that the expression levels of TXNIP and AMPK in the small intestinal tissues of mice in the drug-treated group compared with the model group were significantly changed. Conclusion: SAL may target AMPK and TXNIP domains to act as a therapeutic agent for intestinal IR. These findings comprehensively reveal the potential therapeutic targets for SAL against intestinal IR and provide theoretical basis for the clinical application of SAL in the treatment of intestinal IR. Portland Press Ltd. 2023-08-25 /pmc/articles/PMC10462912/ /pubmed/37530723 http://dx.doi.org/10.1042/BSR20230539 Text en © 2023 The Author(s). https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Cell Death & Injury
Chen, Feng
Chai, Yi-hong
Zhang, Fa
Liu, Yong-qiang
Zhang, Yan
Shi, Ya-jing
Zhang, Jian-ming
Leng, Yu-fang
Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title_full Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title_fullStr Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title_full_unstemmed Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title_short Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
title_sort network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion
topic Cell Death & Injury
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10462912/
https://www.ncbi.nlm.nih.gov/pubmed/37530723
http://dx.doi.org/10.1042/BSR20230539
work_keys_str_mv AT chenfeng networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT chaiyihong networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT zhangfa networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT liuyongqiang networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT zhangyan networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT shiyajing networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT zhangjianming networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion
AT lengyufang networkpharmacologyanalysiscombinedwithexperimentalvalidationtoexplorethetherapeuticmechanismofsalidrosideonintestineischemiareperfusion