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Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer
INTRODUCTION: Ovarian cancer (OC) is one of the most common gynecologic malignant cancers with the current survival rate remaining low. TRPM2 has been reported as a survival predictor in various cancers but not in OC. The aim of this study is to explore the role and its underlying mechanism of TRPM2...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463424/ https://www.ncbi.nlm.nih.gov/pubmed/37608401 http://dx.doi.org/10.1186/s13048-023-01225-y |
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author | Huang, Wei Wu, Yuliang Luo, Ning Shuai, Xueqian Guo, Jing Wang, Chunyan Yang, Fanchun Liu, Li Liu, Shupeng Cheng, Zhongping |
author_facet | Huang, Wei Wu, Yuliang Luo, Ning Shuai, Xueqian Guo, Jing Wang, Chunyan Yang, Fanchun Liu, Li Liu, Shupeng Cheng, Zhongping |
author_sort | Huang, Wei |
collection | PubMed |
description | INTRODUCTION: Ovarian cancer (OC) is one of the most common gynecologic malignant cancers with the current survival rate remaining low. TRPM2 has been reported as a survival predictor in various cancers but not in OC. The aim of this study is to explore the role and its underlying mechanism of TRPM2 in OC. METHODS: The transcriptome data and clinical data were obtained from TCGA, GTEx, and GEO (GSE17260). DriverDBv3 and PrognoScan were used to analyze survival correlations. GSEA analysis was performed to uncover the underlying mechanism. The correlations between TRPM2 and immune score, immune cell infiltration were analyzed by TIMER2.0. RESULTS: TRPM2 was highly expressed in OC and high TRPM2 expression was related to the poor prognosis based on the Kaplan-Meier curves, univariate and multivariate analysis. The enrichment analysis suggested that TRPM2 was involved in immune-related pathways. Positive correlations were also observed between TRPM2 expression and immune score and immune cells covering B cells, T cells, macrophage, neutrophil, and myeloid dendritic cells. We also found that TRPM2 was positively related to immune checkpoints including ICOSLG, CD40, CD86, etc. TRPM2 expression had a positive correlation with M2 macrophage, but not with M1 macrophage. Besides, TRPM2 showed a strong positive correlation with pyroptosis-related genes including NLRP3, NLRC4, NOD2, NOD1, IL1B, GSDMD. CONCLUSION: Our study demonstrated that TRPM2 is a poor prognostic prediction factor in ovarian cancer and is correlated to the immune microenvironment and pyroptosis. TRPM2 may act as a new immunotherapy target, which promoted the survival rate of OC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13048-023-01225-y. |
format | Online Article Text |
id | pubmed-10463424 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-104634242023-08-30 Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer Huang, Wei Wu, Yuliang Luo, Ning Shuai, Xueqian Guo, Jing Wang, Chunyan Yang, Fanchun Liu, Li Liu, Shupeng Cheng, Zhongping J Ovarian Res Research INTRODUCTION: Ovarian cancer (OC) is one of the most common gynecologic malignant cancers with the current survival rate remaining low. TRPM2 has been reported as a survival predictor in various cancers but not in OC. The aim of this study is to explore the role and its underlying mechanism of TRPM2 in OC. METHODS: The transcriptome data and clinical data were obtained from TCGA, GTEx, and GEO (GSE17260). DriverDBv3 and PrognoScan were used to analyze survival correlations. GSEA analysis was performed to uncover the underlying mechanism. The correlations between TRPM2 and immune score, immune cell infiltration were analyzed by TIMER2.0. RESULTS: TRPM2 was highly expressed in OC and high TRPM2 expression was related to the poor prognosis based on the Kaplan-Meier curves, univariate and multivariate analysis. The enrichment analysis suggested that TRPM2 was involved in immune-related pathways. Positive correlations were also observed between TRPM2 expression and immune score and immune cells covering B cells, T cells, macrophage, neutrophil, and myeloid dendritic cells. We also found that TRPM2 was positively related to immune checkpoints including ICOSLG, CD40, CD86, etc. TRPM2 expression had a positive correlation with M2 macrophage, but not with M1 macrophage. Besides, TRPM2 showed a strong positive correlation with pyroptosis-related genes including NLRP3, NLRC4, NOD2, NOD1, IL1B, GSDMD. CONCLUSION: Our study demonstrated that TRPM2 is a poor prognostic prediction factor in ovarian cancer and is correlated to the immune microenvironment and pyroptosis. TRPM2 may act as a new immunotherapy target, which promoted the survival rate of OC patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13048-023-01225-y. BioMed Central 2023-08-22 /pmc/articles/PMC10463424/ /pubmed/37608401 http://dx.doi.org/10.1186/s13048-023-01225-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Huang, Wei Wu, Yuliang Luo, Ning Shuai, Xueqian Guo, Jing Wang, Chunyan Yang, Fanchun Liu, Li Liu, Shupeng Cheng, Zhongping Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title | Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title_full | Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title_fullStr | Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title_full_unstemmed | Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title_short | Identification of TRPM2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
title_sort | identification of trpm2 as a prognostic factor correlated with immune infiltration in ovarian cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463424/ https://www.ncbi.nlm.nih.gov/pubmed/37608401 http://dx.doi.org/10.1186/s13048-023-01225-y |
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