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Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images

PURPOSE: This study aimed to develop and validate a deep learning-based method that detects inter-breath-hold motion from an estimated cardiac long axis image reconstructed from a stack of short axis cardiac cine images. METHODS: Cardiac cine magnetic resonance image data from all short axis slices...

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Autores principales: Kim, Yoon-Chul, Kim, Min Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463654/
https://www.ncbi.nlm.nih.gov/pubmed/37620849
http://dx.doi.org/10.1186/s12880-023-01070-x
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author Kim, Yoon-Chul
Kim, Min Woo
author_facet Kim, Yoon-Chul
Kim, Min Woo
author_sort Kim, Yoon-Chul
collection PubMed
description PURPOSE: This study aimed to develop and validate a deep learning-based method that detects inter-breath-hold motion from an estimated cardiac long axis image reconstructed from a stack of short axis cardiac cine images. METHODS: Cardiac cine magnetic resonance image data from all short axis slices and 2-/3-/4-chamber long axis slices were considered for the study. Data from 740 subjects were used for model development, and data from 491 subjects were used for testing. The method utilized the slice orientation information to calculate the intersection line of a short axis plane and a long axis plane. An estimated long axis image is shown along with a long axis image as a motion-free reference image, which enables visual assessment of the inter-breath-hold motion from the estimated long axis image. The estimated long axis image was labeled as either a motion-corrupted or a motion-free image. Deep convolutional neural network (CNN) models were developed and validated using the labeled data. RESULTS: The method was fully automatic in obtaining long axis images reformatted from a 3D stack of short axis slices and predicting the presence/absence of inter-breath-hold motion. The deep CNN model with EfficientNet-B0 as a feature extractor was effective at motion detection with an area under the receiver operating characteristic (AUC) curve of 0.87 for the testing data. CONCLUSION: The proposed method can automatically assess inter-breath-hold motion in a stack of cardiac cine short axis slices. The method can help prospectively reacquire problematic short axis slices or retrospectively correct motion. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12880-023-01070-x.
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spelling pubmed-104636542023-08-30 Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images Kim, Yoon-Chul Kim, Min Woo BMC Med Imaging Research PURPOSE: This study aimed to develop and validate a deep learning-based method that detects inter-breath-hold motion from an estimated cardiac long axis image reconstructed from a stack of short axis cardiac cine images. METHODS: Cardiac cine magnetic resonance image data from all short axis slices and 2-/3-/4-chamber long axis slices were considered for the study. Data from 740 subjects were used for model development, and data from 491 subjects were used for testing. The method utilized the slice orientation information to calculate the intersection line of a short axis plane and a long axis plane. An estimated long axis image is shown along with a long axis image as a motion-free reference image, which enables visual assessment of the inter-breath-hold motion from the estimated long axis image. The estimated long axis image was labeled as either a motion-corrupted or a motion-free image. Deep convolutional neural network (CNN) models were developed and validated using the labeled data. RESULTS: The method was fully automatic in obtaining long axis images reformatted from a 3D stack of short axis slices and predicting the presence/absence of inter-breath-hold motion. The deep CNN model with EfficientNet-B0 as a feature extractor was effective at motion detection with an area under the receiver operating characteristic (AUC) curve of 0.87 for the testing data. CONCLUSION: The proposed method can automatically assess inter-breath-hold motion in a stack of cardiac cine short axis slices. The method can help prospectively reacquire problematic short axis slices or retrospectively correct motion. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12880-023-01070-x. BioMed Central 2023-08-24 /pmc/articles/PMC10463654/ /pubmed/37620849 http://dx.doi.org/10.1186/s12880-023-01070-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Kim, Yoon-Chul
Kim, Min Woo
Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title_full Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title_fullStr Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title_full_unstemmed Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title_short Evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
title_sort evaluation of convolutional neural networks for the detection of inter-breath-hold motion from a stack of cardiac short axis slice images
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463654/
https://www.ncbi.nlm.nih.gov/pubmed/37620849
http://dx.doi.org/10.1186/s12880-023-01070-x
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