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Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study
BACKGROUND: A prospective study of multiple small samples found that idiopathic pulmonary fibrosis (IPF) is often accompanied by a deficiency in Vitamin D levels. However, the causal relationship between the two remains to be determined. Therefore, our study aims to investigate the causal effect of...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463904/ https://www.ncbi.nlm.nih.gov/pubmed/37612740 http://dx.doi.org/10.1186/s12890-023-02589-z |
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author | Lin, Tong Zhou, Fen Mao, Haiyan Xie, Zhenye Jin, Yuhong |
author_facet | Lin, Tong Zhou, Fen Mao, Haiyan Xie, Zhenye Jin, Yuhong |
author_sort | Lin, Tong |
collection | PubMed |
description | BACKGROUND: A prospective study of multiple small samples found that idiopathic pulmonary fibrosis (IPF) is often accompanied by a deficiency in Vitamin D levels. However, the causal relationship between the two remains to be determined. Therefore, our study aims to investigate the causal effect of serum 1,25-hydroxyvitamin D (25(OH)D) on the risk of IPF through a two-sample Mendelian randomization (MR) analysis. METHODS: Through data analysis from two European ancestry-based genome-wide association studies (GWAS), including 401,460 individuals for 25(OH)D levels and 1028 individuals for IPF, we primarily employed inverse-variance weighted (IVW) to assess the causal effect of 25(OH)D levels on IPF risk. MR-Egger regression test was used to determine pleiotropy, and Cochran’s Q test was conducted for heterogeneity testing. Leave-one-out analysis was conducted to examine the robustness of the results. RESULTS: 158 SNPs related to serum 25(OH)D were used as instrumental variables (IVs). The MR analyses revealed no evidence supporting a causal association between the level of circulating 25(OH)D and the risk of IPF. The IVW method [OR 0.891, 95%CI (0.523–1.518), P = 0.670]; There was no significant level of heterogeneity, pleiotropy and bias in IVs. Cochran’s Q test for heterogeneity (MR Egger P = 0.081; IVW P = 0.089); MR-Egger regression for pleiotropy (P = 0.774). CONCLUSIONS: This MR Study suggests that genetically predicted circulating vitamin D concentrations in the general population are not causally related to IPF. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02589-z. |
format | Online Article Text |
id | pubmed-10463904 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-104639042023-08-30 Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study Lin, Tong Zhou, Fen Mao, Haiyan Xie, Zhenye Jin, Yuhong BMC Pulm Med Research BACKGROUND: A prospective study of multiple small samples found that idiopathic pulmonary fibrosis (IPF) is often accompanied by a deficiency in Vitamin D levels. However, the causal relationship between the two remains to be determined. Therefore, our study aims to investigate the causal effect of serum 1,25-hydroxyvitamin D (25(OH)D) on the risk of IPF through a two-sample Mendelian randomization (MR) analysis. METHODS: Through data analysis from two European ancestry-based genome-wide association studies (GWAS), including 401,460 individuals for 25(OH)D levels and 1028 individuals for IPF, we primarily employed inverse-variance weighted (IVW) to assess the causal effect of 25(OH)D levels on IPF risk. MR-Egger regression test was used to determine pleiotropy, and Cochran’s Q test was conducted for heterogeneity testing. Leave-one-out analysis was conducted to examine the robustness of the results. RESULTS: 158 SNPs related to serum 25(OH)D were used as instrumental variables (IVs). The MR analyses revealed no evidence supporting a causal association between the level of circulating 25(OH)D and the risk of IPF. The IVW method [OR 0.891, 95%CI (0.523–1.518), P = 0.670]; There was no significant level of heterogeneity, pleiotropy and bias in IVs. Cochran’s Q test for heterogeneity (MR Egger P = 0.081; IVW P = 0.089); MR-Egger regression for pleiotropy (P = 0.774). CONCLUSIONS: This MR Study suggests that genetically predicted circulating vitamin D concentrations in the general population are not causally related to IPF. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12890-023-02589-z. BioMed Central 2023-08-23 /pmc/articles/PMC10463904/ /pubmed/37612740 http://dx.doi.org/10.1186/s12890-023-02589-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Lin, Tong Zhou, Fen Mao, Haiyan Xie, Zhenye Jin, Yuhong Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title | Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title_full | Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title_fullStr | Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title_full_unstemmed | Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title_short | Vitamin D and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
title_sort | vitamin d and idiopathic pulmonary fibrosis: a two-sample mendelian randomization study |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10463904/ https://www.ncbi.nlm.nih.gov/pubmed/37612740 http://dx.doi.org/10.1186/s12890-023-02589-z |
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