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Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by Ca . Methanoperedenaceae
The family Ca. Methanoperedenaceae archaea mediates the anaerobic oxidation of methane (AOM) in different terrestrial environments. Using a newly developed high‐pressure laboratory incubation system, we investigated 214‐ and 249‐m deep groundwater samples at Horonobe Underground Research Laboratory,...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10464669/ https://www.ncbi.nlm.nih.gov/pubmed/36779262 http://dx.doi.org/10.1111/1758-2229.13146 |
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author | Nishimura, Hiroki Kouduka, Mariko Fukuda, Akari Ishimura, Toyoho Amano, Yuki Beppu, Hikari Miyakawa, Kazuya Suzuki, Yohey |
author_facet | Nishimura, Hiroki Kouduka, Mariko Fukuda, Akari Ishimura, Toyoho Amano, Yuki Beppu, Hikari Miyakawa, Kazuya Suzuki, Yohey |
author_sort | Nishimura, Hiroki |
collection | PubMed |
description | The family Ca. Methanoperedenaceae archaea mediates the anaerobic oxidation of methane (AOM) in different terrestrial environments. Using a newly developed high‐pressure laboratory incubation system, we investigated 214‐ and 249‐m deep groundwater samples at Horonobe Underground Research Laboratory, Japan, where the high and low abundances of Ca. Methanoperedenaceae archaea have been shown by genome‐resolved metagenomics, respectively. The groundwater samples amended with (13)C‐labelled methane and amorphous Fe(III) were incubated at a pressure of 1.6 MPa. After 3–7 days of incubation, the AOM rate was 45.8 ± 19.8 nM/day in 214‐m groundwater. However, almost no activity was detected from 249‐m groundwater. Based on the results from 16S rRNA gene analysis, the abundance of Ca. Methanoperedenaceae archaea was high in the 214‐m deep groundwater sample, whereas Ca. Methanoperedenaceae archaea was undetected in the 249‐m deep groundwater sample. These results support the in situ AOM activity of Ca. Methanoperedenaceae archaea in the 214‐m deep subsurface borehole interval. Although the presence of Fe‐bearing phyllosilicates was demonstrated in the 214‐m deep groundwater, it needs to be determined whether Ca. Methanoperedenaceae archaea use the Fe‐bearing phyllosilicates as in situ electron acceptors by high‐pressure incubation amended with the Fe‐bearing phyllosilicates. |
format | Online Article Text |
id | pubmed-10464669 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104646692023-08-30 Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by Ca . Methanoperedenaceae Nishimura, Hiroki Kouduka, Mariko Fukuda, Akari Ishimura, Toyoho Amano, Yuki Beppu, Hikari Miyakawa, Kazuya Suzuki, Yohey Environ Microbiol Rep Brief Reports The family Ca. Methanoperedenaceae archaea mediates the anaerobic oxidation of methane (AOM) in different terrestrial environments. Using a newly developed high‐pressure laboratory incubation system, we investigated 214‐ and 249‐m deep groundwater samples at Horonobe Underground Research Laboratory, Japan, where the high and low abundances of Ca. Methanoperedenaceae archaea have been shown by genome‐resolved metagenomics, respectively. The groundwater samples amended with (13)C‐labelled methane and amorphous Fe(III) were incubated at a pressure of 1.6 MPa. After 3–7 days of incubation, the AOM rate was 45.8 ± 19.8 nM/day in 214‐m groundwater. However, almost no activity was detected from 249‐m groundwater. Based on the results from 16S rRNA gene analysis, the abundance of Ca. Methanoperedenaceae archaea was high in the 214‐m deep groundwater sample, whereas Ca. Methanoperedenaceae archaea was undetected in the 249‐m deep groundwater sample. These results support the in situ AOM activity of Ca. Methanoperedenaceae archaea in the 214‐m deep subsurface borehole interval. Although the presence of Fe‐bearing phyllosilicates was demonstrated in the 214‐m deep groundwater, it needs to be determined whether Ca. Methanoperedenaceae archaea use the Fe‐bearing phyllosilicates as in situ electron acceptors by high‐pressure incubation amended with the Fe‐bearing phyllosilicates. John Wiley & Sons, Inc. 2023-02-13 /pmc/articles/PMC10464669/ /pubmed/36779262 http://dx.doi.org/10.1111/1758-2229.13146 Text en © 2023 The Authors. Environmental Microbiology Reports published by Applied Microbiology International and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Brief Reports Nishimura, Hiroki Kouduka, Mariko Fukuda, Akari Ishimura, Toyoho Amano, Yuki Beppu, Hikari Miyakawa, Kazuya Suzuki, Yohey Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by Ca . Methanoperedenaceae |
title | Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
Ca
. Methanoperedenaceae |
title_full | Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
Ca
. Methanoperedenaceae |
title_fullStr | Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
Ca
. Methanoperedenaceae |
title_full_unstemmed | Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
Ca
. Methanoperedenaceae |
title_short | Anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
Ca
. Methanoperedenaceae |
title_sort | anaerobic methane‐oxidizing activity in a deep underground borehole dominantly colonized by
ca
. methanoperedenaceae |
topic | Brief Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10464669/ https://www.ncbi.nlm.nih.gov/pubmed/36779262 http://dx.doi.org/10.1111/1758-2229.13146 |
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