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Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity

Sponges pump water to filter feed and for diffusive oxygen uptake. In doing so, trace DNA fragments from a multitude of organisms living around them are trapped in their tissues. Here we show that the environmental DNA retrieved from archived marine sponge specimens can reconstruct the fish communit...

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Autores principales: Neave, Erika F., Cai, Wang, Arias, Maria Belén, Harper, Lynsey R., Riesgo, Ana, Mariani, Stefano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10465980/
https://www.ncbi.nlm.nih.gov/pubmed/37644836
http://dx.doi.org/10.1098/rspb.2023.0771
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author Neave, Erika F.
Cai, Wang
Arias, Maria Belén
Harper, Lynsey R.
Riesgo, Ana
Mariani, Stefano
author_facet Neave, Erika F.
Cai, Wang
Arias, Maria Belén
Harper, Lynsey R.
Riesgo, Ana
Mariani, Stefano
author_sort Neave, Erika F.
collection PubMed
description Sponges pump water to filter feed and for diffusive oxygen uptake. In doing so, trace DNA fragments from a multitude of organisms living around them are trapped in their tissues. Here we show that the environmental DNA retrieved from archived marine sponge specimens can reconstruct the fish communities at the place of sampling and discriminate North Atlantic assemblages according to biogeographic region (from Western Greenland to Svalbard), depth habitat (80–1600 m), and even the level of protection in place. Given the cost associated with ocean biodiversity surveys, we argue that targeted and opportunistic sponge samples – as well as the specimens already stored in museums and other research collections – represent an invaluable trove of biodiversity information that can significantly extend the reach of ocean monitoring.
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spelling pubmed-104659802023-10-06 Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity Neave, Erika F. Cai, Wang Arias, Maria Belén Harper, Lynsey R. Riesgo, Ana Mariani, Stefano Proc Biol Sci Ecology Sponges pump water to filter feed and for diffusive oxygen uptake. In doing so, trace DNA fragments from a multitude of organisms living around them are trapped in their tissues. Here we show that the environmental DNA retrieved from archived marine sponge specimens can reconstruct the fish communities at the place of sampling and discriminate North Atlantic assemblages according to biogeographic region (from Western Greenland to Svalbard), depth habitat (80–1600 m), and even the level of protection in place. Given the cost associated with ocean biodiversity surveys, we argue that targeted and opportunistic sponge samples – as well as the specimens already stored in museums and other research collections – represent an invaluable trove of biodiversity information that can significantly extend the reach of ocean monitoring. The Royal Society 2023-08-30 2023-08-30 /pmc/articles/PMC10465980/ /pubmed/37644836 http://dx.doi.org/10.1098/rspb.2023.0771 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Ecology
Neave, Erika F.
Cai, Wang
Arias, Maria Belén
Harper, Lynsey R.
Riesgo, Ana
Mariani, Stefano
Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title_full Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title_fullStr Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title_full_unstemmed Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title_short Trapped DNA fragments in marine sponge specimens unveil North Atlantic deep-sea fish diversity
title_sort trapped dna fragments in marine sponge specimens unveil north atlantic deep-sea fish diversity
topic Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10465980/
https://www.ncbi.nlm.nih.gov/pubmed/37644836
http://dx.doi.org/10.1098/rspb.2023.0771
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