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A display and analysis platform for gut microbiomes of minority people and phenotypic data in China

The minority people panmicrobial community database (MPPCD website: http://mppmcdb.cloudna.cn/) is the first microbe-disease association database of Chinese ethnic minorities. To research the relationships between intestinal microbes and diseases/health in the ethnic minorities, we collected the mic...

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Autores principales: Li, Jun, Wei, Chunxue, Zhou, Ting, Mo, Chunfen, Wang, Guanjun, He, Feng, Wang, Pengyu, Qin, Ling, Peng, Fujun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10469205/
https://www.ncbi.nlm.nih.gov/pubmed/37648696
http://dx.doi.org/10.1038/s41598-023-36754-5
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author Li, Jun
Wei, Chunxue
Zhou, Ting
Mo, Chunfen
Wang, Guanjun
He, Feng
Wang, Pengyu
Qin, Ling
Peng, Fujun
author_facet Li, Jun
Wei, Chunxue
Zhou, Ting
Mo, Chunfen
Wang, Guanjun
He, Feng
Wang, Pengyu
Qin, Ling
Peng, Fujun
author_sort Li, Jun
collection PubMed
description The minority people panmicrobial community database (MPPCD website: http://mppmcdb.cloudna.cn/) is the first microbe-disease association database of Chinese ethnic minorities. To research the relationships between intestinal microbes and diseases/health in the ethnic minorities, we collected the microbes of the Han people for comparison. Based on the data, such as age, among the different ethnic groups of the different regions of Sichuan Province, MPPCD not only provided the gut microbial composition but also presented the relative abundance value at the phylum, class, order, family and genus levels in different groups. In addition, differential analysis was performed in different microbes in the two different groups, which contributed to exploring the difference in intestinal microbe structures between the two groups. Meanwhile, a series of related factors, including age, sex, body mass index, ethnicity, physical condition, and living altitude, were included in the MPPCD, with special focus on living altitude. To date, this is the first intestinal microbe database to introduce altitude features. In conclusion, we hope that MPPCD will serve as a fundamental research support for the relationship between human gut microbes and host health and disease, especially in ethnic minorities.
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spelling pubmed-104692052023-09-01 A display and analysis platform for gut microbiomes of minority people and phenotypic data in China Li, Jun Wei, Chunxue Zhou, Ting Mo, Chunfen Wang, Guanjun He, Feng Wang, Pengyu Qin, Ling Peng, Fujun Sci Rep Article The minority people panmicrobial community database (MPPCD website: http://mppmcdb.cloudna.cn/) is the first microbe-disease association database of Chinese ethnic minorities. To research the relationships between intestinal microbes and diseases/health in the ethnic minorities, we collected the microbes of the Han people for comparison. Based on the data, such as age, among the different ethnic groups of the different regions of Sichuan Province, MPPCD not only provided the gut microbial composition but also presented the relative abundance value at the phylum, class, order, family and genus levels in different groups. In addition, differential analysis was performed in different microbes in the two different groups, which contributed to exploring the difference in intestinal microbe structures between the two groups. Meanwhile, a series of related factors, including age, sex, body mass index, ethnicity, physical condition, and living altitude, were included in the MPPCD, with special focus on living altitude. To date, this is the first intestinal microbe database to introduce altitude features. In conclusion, we hope that MPPCD will serve as a fundamental research support for the relationship between human gut microbes and host health and disease, especially in ethnic minorities. Nature Publishing Group UK 2023-08-30 /pmc/articles/PMC10469205/ /pubmed/37648696 http://dx.doi.org/10.1038/s41598-023-36754-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Li, Jun
Wei, Chunxue
Zhou, Ting
Mo, Chunfen
Wang, Guanjun
He, Feng
Wang, Pengyu
Qin, Ling
Peng, Fujun
A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title_full A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title_fullStr A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title_full_unstemmed A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title_short A display and analysis platform for gut microbiomes of minority people and phenotypic data in China
title_sort display and analysis platform for gut microbiomes of minority people and phenotypic data in china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10469205/
https://www.ncbi.nlm.nih.gov/pubmed/37648696
http://dx.doi.org/10.1038/s41598-023-36754-5
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