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Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data

Rapid, non-destructive and automated salt tolerance evaluation is particularly important for screening salt-tolerant germplasm of alfalfa. Traditional evaluation of salt tolerance is mostly based on phenotypic traits obtained by some broken ways, which is time-consuming and difficult to meet the nee...

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Autores principales: Zhang, Jiaxin, Zhang, Aiwu, Liu, Zixuan, He, Wanting, Yang, Shengyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10470838/
https://www.ncbi.nlm.nih.gov/pubmed/37662154
http://dx.doi.org/10.3389/fpls.2023.1200501
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author Zhang, Jiaxin
Zhang, Aiwu
Liu, Zixuan
He, Wanting
Yang, Shengyuan
author_facet Zhang, Jiaxin
Zhang, Aiwu
Liu, Zixuan
He, Wanting
Yang, Shengyuan
author_sort Zhang, Jiaxin
collection PubMed
description Rapid, non-destructive and automated salt tolerance evaluation is particularly important for screening salt-tolerant germplasm of alfalfa. Traditional evaluation of salt tolerance is mostly based on phenotypic traits obtained by some broken ways, which is time-consuming and difficult to meet the needs of large-scale breeding screening. Therefore, this paper proposed a non-contact and non-destructive multi-index fuzzy comprehensive evaluation model for evaluating the salt tolerance of alfalfa from Light Detection and Ranging data (LiDAR) and HyperSpectral Image data (HSI). Firstly, the structural traits related to growth status were extracted from the LiDAR data of alfalfa, and the spectral traits representing the physical and chemical characteristics were extracted from HSI data. In this paper, these phenotypic traits obtained automatically by computation were called Computing Phenotypic Traits (CPT). Subsequently, the multi-index fuzzy evaluation system of alfalfa salt tolerance was constructed by CPT, and according to the fuzzy mathematics theory, a multi-index Fuzzy Comprehensive Evaluation model with information Entropy of alfalfa salt tolerance (FCE-E) was proposed, which comprehensively evaluated the salt tolerance of alfalfa from the aspects of growth structure, physiology and biochemistry. Finally, comparative experiments showed that: (1) The multi-index FCE-E model based on the CPT was proposed in this paper, which could find more salt-sensitive information than the evaluation method based on the measured Typical Phenotypic Traits (TPT) such as fresh weight, dry weight, water content and chlorophyll. The two evaluation results had 66.67% consistent results, indicating that the multi-index FCE-E model integrates more information about alfalfa and more comprehensive evaluation. (2) On the basis of the CPT, the results of the multi-index FCE-E method were basically consistent with those of Principal Component Analysis (PCA), indicating that the multi-index FCE-E model could accurately evaluate the salt tolerance of alfalfa. Three highly salt-tolerant alfalfa varieties and two highly salt-susceptible alfalfa varieties were screened by the multi-index FCE-E method. The multi-index FCE-E method provides a new method for non-contact non-destructive evaluation of salt tolerance of alfalfa.
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spelling pubmed-104708382023-09-01 Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data Zhang, Jiaxin Zhang, Aiwu Liu, Zixuan He, Wanting Yang, Shengyuan Front Plant Sci Plant Science Rapid, non-destructive and automated salt tolerance evaluation is particularly important for screening salt-tolerant germplasm of alfalfa. Traditional evaluation of salt tolerance is mostly based on phenotypic traits obtained by some broken ways, which is time-consuming and difficult to meet the needs of large-scale breeding screening. Therefore, this paper proposed a non-contact and non-destructive multi-index fuzzy comprehensive evaluation model for evaluating the salt tolerance of alfalfa from Light Detection and Ranging data (LiDAR) and HyperSpectral Image data (HSI). Firstly, the structural traits related to growth status were extracted from the LiDAR data of alfalfa, and the spectral traits representing the physical and chemical characteristics were extracted from HSI data. In this paper, these phenotypic traits obtained automatically by computation were called Computing Phenotypic Traits (CPT). Subsequently, the multi-index fuzzy evaluation system of alfalfa salt tolerance was constructed by CPT, and according to the fuzzy mathematics theory, a multi-index Fuzzy Comprehensive Evaluation model with information Entropy of alfalfa salt tolerance (FCE-E) was proposed, which comprehensively evaluated the salt tolerance of alfalfa from the aspects of growth structure, physiology and biochemistry. Finally, comparative experiments showed that: (1) The multi-index FCE-E model based on the CPT was proposed in this paper, which could find more salt-sensitive information than the evaluation method based on the measured Typical Phenotypic Traits (TPT) such as fresh weight, dry weight, water content and chlorophyll. The two evaluation results had 66.67% consistent results, indicating that the multi-index FCE-E model integrates more information about alfalfa and more comprehensive evaluation. (2) On the basis of the CPT, the results of the multi-index FCE-E method were basically consistent with those of Principal Component Analysis (PCA), indicating that the multi-index FCE-E model could accurately evaluate the salt tolerance of alfalfa. Three highly salt-tolerant alfalfa varieties and two highly salt-susceptible alfalfa varieties were screened by the multi-index FCE-E method. The multi-index FCE-E method provides a new method for non-contact non-destructive evaluation of salt tolerance of alfalfa. Frontiers Media S.A. 2023-08-17 /pmc/articles/PMC10470838/ /pubmed/37662154 http://dx.doi.org/10.3389/fpls.2023.1200501 Text en Copyright © 2023 Zhang, Zhang, Liu, He and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Zhang, Jiaxin
Zhang, Aiwu
Liu, Zixuan
He, Wanting
Yang, Shengyuan
Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title_full Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title_fullStr Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title_full_unstemmed Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title_short Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data
title_sort multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on lidar data and hyperspectral image data
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10470838/
https://www.ncbi.nlm.nih.gov/pubmed/37662154
http://dx.doi.org/10.3389/fpls.2023.1200501
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