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Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
Herein, network pharmacology was used to identify the active components in Ilex kudingcha and common hypertension-related targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted, and molecular docking was performed to verify molecular dynamic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10470839/ https://www.ncbi.nlm.nih.gov/pubmed/37664830 http://dx.doi.org/10.3389/fendo.2023.1216086 |
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author | Liao, Fei Yousif, Muhammad Huang, Ruya Qiao, Yanlong Hu, Yanchun |
author_facet | Liao, Fei Yousif, Muhammad Huang, Ruya Qiao, Yanlong Hu, Yanchun |
author_sort | Liao, Fei |
collection | PubMed |
description | Herein, network pharmacology was used to identify the active components in Ilex kudingcha and common hypertension-related targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted, and molecular docking was performed to verify molecular dynamic simulations. Six active components in Ilex kudingcha were identified; furthermore, 123 target genes common to hypertension were identified. Topological analysis revealed the strongly associated proteins, with RELA, AKT1, JUN, TP53, TNF, and MAPK1 being the predicted targets of the studied traditional Chinese medicine. In addition, GO enrichment analysis revealed significant enrichment of biological processes such as oxidative stress, epithelial cell proliferation, cellular response to chemical stress, response to xenobiotic stimulus, and wound healing. Furthermore, KEGG enrichment analysis revealed that the genes were particularly enriched in lipid and atherosclerosis, fluid shear stress and atherosclerosis, and other pathways. Molecular docking revealed that the key components in Ilex kudingcha exhibited good binding potential to the target genes RELA, AKT1, JUN, TP53, TNF, and IL-6. Our study results suggest that Ilex kudingcha plays a role in hypertension treatment by exerting hypolipidemic, anti-inflammatory, and antioxidant effects and inhibiting the transcription of atherosclerosis-related genes. |
format | Online Article Text |
id | pubmed-10470839 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104708392023-09-01 Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha Liao, Fei Yousif, Muhammad Huang, Ruya Qiao, Yanlong Hu, Yanchun Front Endocrinol (Lausanne) Endocrinology Herein, network pharmacology was used to identify the active components in Ilex kudingcha and common hypertension-related targets. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted, and molecular docking was performed to verify molecular dynamic simulations. Six active components in Ilex kudingcha were identified; furthermore, 123 target genes common to hypertension were identified. Topological analysis revealed the strongly associated proteins, with RELA, AKT1, JUN, TP53, TNF, and MAPK1 being the predicted targets of the studied traditional Chinese medicine. In addition, GO enrichment analysis revealed significant enrichment of biological processes such as oxidative stress, epithelial cell proliferation, cellular response to chemical stress, response to xenobiotic stimulus, and wound healing. Furthermore, KEGG enrichment analysis revealed that the genes were particularly enriched in lipid and atherosclerosis, fluid shear stress and atherosclerosis, and other pathways. Molecular docking revealed that the key components in Ilex kudingcha exhibited good binding potential to the target genes RELA, AKT1, JUN, TP53, TNF, and IL-6. Our study results suggest that Ilex kudingcha plays a role in hypertension treatment by exerting hypolipidemic, anti-inflammatory, and antioxidant effects and inhibiting the transcription of atherosclerosis-related genes. Frontiers Media S.A. 2023-08-17 /pmc/articles/PMC10470839/ /pubmed/37664830 http://dx.doi.org/10.3389/fendo.2023.1216086 Text en Copyright © 2023 Liao, Yousif, Huang, Qiao and Hu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Endocrinology Liao, Fei Yousif, Muhammad Huang, Ruya Qiao, Yanlong Hu, Yanchun Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha |
title | Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
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title_full | Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
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title_fullStr | Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
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title_full_unstemmed | Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
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title_short | Network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of Ilex kudingcha
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title_sort | network pharmacology- and molecular docking-based analyses of the antihypertensive mechanism of ilex kudingcha |
topic | Endocrinology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10470839/ https://www.ncbi.nlm.nih.gov/pubmed/37664830 http://dx.doi.org/10.3389/fendo.2023.1216086 |
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