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Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli

Vitamin B(6) is an essential nutrient with extensive applications in the medicine, food, animal feed, and cosmetics industries. Pyridoxine (PN), the most common commercial form of vitamin B(6), is currently chemically synthesized using expensive and toxic chemicals. However, the low catalytic effici...

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Autores principales: Liu, Linxia, Li, Jinlong, Gai, Yuanming, Tian, Zhizhong, Wang, Yanyan, Wang, Tenghe, Liu, Pi, Yuan, Qianqian, Ma, Hongwu, Lee, Sang Yup, Zhang, Dawei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10471632/
https://www.ncbi.nlm.nih.gov/pubmed/37652926
http://dx.doi.org/10.1038/s41467-023-40928-0
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author Liu, Linxia
Li, Jinlong
Gai, Yuanming
Tian, Zhizhong
Wang, Yanyan
Wang, Tenghe
Liu, Pi
Yuan, Qianqian
Ma, Hongwu
Lee, Sang Yup
Zhang, Dawei
author_facet Liu, Linxia
Li, Jinlong
Gai, Yuanming
Tian, Zhizhong
Wang, Yanyan
Wang, Tenghe
Liu, Pi
Yuan, Qianqian
Ma, Hongwu
Lee, Sang Yup
Zhang, Dawei
author_sort Liu, Linxia
collection PubMed
description Vitamin B(6) is an essential nutrient with extensive applications in the medicine, food, animal feed, and cosmetics industries. Pyridoxine (PN), the most common commercial form of vitamin B(6), is currently chemically synthesized using expensive and toxic chemicals. However, the low catalytic efficiencies of natural enzymes and the tight regulation of the metabolic pathway have hindered PN production by the microbial fermentation process. Here, we report an engineered Escherichia coli strain for PN production. Parallel pathway engineering is performed to decouple PN production and cell growth. Further, protein engineering is rationally designed including the inefficient enzymes PdxA, PdxJ, and the initial enzymes Epd and Dxs. By the iterative multimodule optimization strategy, the final strain produces 1.4 g/L of PN with productivity of 29.16 mg/L/h by fed-batch fermentation. The strategies reported here will be useful for developing microbial strains for the production of vitamins and other bioproducts having inherently low metabolic fluxes.
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spelling pubmed-104716322023-09-02 Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli Liu, Linxia Li, Jinlong Gai, Yuanming Tian, Zhizhong Wang, Yanyan Wang, Tenghe Liu, Pi Yuan, Qianqian Ma, Hongwu Lee, Sang Yup Zhang, Dawei Nat Commun Article Vitamin B(6) is an essential nutrient with extensive applications in the medicine, food, animal feed, and cosmetics industries. Pyridoxine (PN), the most common commercial form of vitamin B(6), is currently chemically synthesized using expensive and toxic chemicals. However, the low catalytic efficiencies of natural enzymes and the tight regulation of the metabolic pathway have hindered PN production by the microbial fermentation process. Here, we report an engineered Escherichia coli strain for PN production. Parallel pathway engineering is performed to decouple PN production and cell growth. Further, protein engineering is rationally designed including the inefficient enzymes PdxA, PdxJ, and the initial enzymes Epd and Dxs. By the iterative multimodule optimization strategy, the final strain produces 1.4 g/L of PN with productivity of 29.16 mg/L/h by fed-batch fermentation. The strategies reported here will be useful for developing microbial strains for the production of vitamins and other bioproducts having inherently low metabolic fluxes. Nature Publishing Group UK 2023-08-31 /pmc/articles/PMC10471632/ /pubmed/37652926 http://dx.doi.org/10.1038/s41467-023-40928-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Liu, Linxia
Li, Jinlong
Gai, Yuanming
Tian, Zhizhong
Wang, Yanyan
Wang, Tenghe
Liu, Pi
Yuan, Qianqian
Ma, Hongwu
Lee, Sang Yup
Zhang, Dawei
Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title_full Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title_fullStr Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title_full_unstemmed Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title_short Protein engineering and iterative multimodule optimization for vitamin B(6) production in Escherichia coli
title_sort protein engineering and iterative multimodule optimization for vitamin b(6) production in escherichia coli
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10471632/
https://www.ncbi.nlm.nih.gov/pubmed/37652926
http://dx.doi.org/10.1038/s41467-023-40928-0
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