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Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research
In this issue, Naimi et al. (Am J Epidemiol. 2023;192(9):1536–1544) discuss a critical topic in public health and beyond: obtaining valid statistical inference when using machine learning in causal research. In doing so, the authors review recent prominent methodological work and recommend: 1) doubl...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10472326/ https://www.ncbi.nlm.nih.gov/pubmed/34268553 http://dx.doi.org/10.1093/aje/kwab200 |
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author | Balzer, Laura B Westling, Ted |
author_facet | Balzer, Laura B Westling, Ted |
author_sort | Balzer, Laura B |
collection | PubMed |
description | In this issue, Naimi et al. (Am J Epidemiol. 2023;192(9):1536–1544) discuss a critical topic in public health and beyond: obtaining valid statistical inference when using machine learning in causal research. In doing so, the authors review recent prominent methodological work and recommend: 1) doubly robust estimators, such as targeted maximum likelihood estimation (TMLE); 2) ensemble methods, such as Super Learner, to combine predictions from a diverse library of algorithms; and 3) sample splitting to reduce bias and improve inference. We largely agree with these recommendations. In this commentary, we highlight the critical importance of the Super Learner library. Specifically, in both simulation settings considered by the authors, we demonstrate that reductions in bias and improvements in confidence-interval coverage can be achieved using TMLE without sample splitting and with a Super Learner library that excludes tree-based methods but includes regression splines. Whether extremely data-adaptive algorithms and sample splitting are needed depends on the specific problem and should be informed by simulations reflecting the specific application. More research is needed on practical recommendations for selecting among these options in common situations arising in epidemiology. |
format | Online Article Text |
id | pubmed-10472326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-104723262023-09-02 Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research Balzer, Laura B Westling, Ted Am J Epidemiol Invited Commentary In this issue, Naimi et al. (Am J Epidemiol. 2023;192(9):1536–1544) discuss a critical topic in public health and beyond: obtaining valid statistical inference when using machine learning in causal research. In doing so, the authors review recent prominent methodological work and recommend: 1) doubly robust estimators, such as targeted maximum likelihood estimation (TMLE); 2) ensemble methods, such as Super Learner, to combine predictions from a diverse library of algorithms; and 3) sample splitting to reduce bias and improve inference. We largely agree with these recommendations. In this commentary, we highlight the critical importance of the Super Learner library. Specifically, in both simulation settings considered by the authors, we demonstrate that reductions in bias and improvements in confidence-interval coverage can be achieved using TMLE without sample splitting and with a Super Learner library that excludes tree-based methods but includes regression splines. Whether extremely data-adaptive algorithms and sample splitting are needed depends on the specific problem and should be informed by simulations reflecting the specific application. More research is needed on practical recommendations for selecting among these options in common situations arising in epidemiology. Oxford University Press 2021-07-15 /pmc/articles/PMC10472326/ /pubmed/34268553 http://dx.doi.org/10.1093/aje/kwab200 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Invited Commentary Balzer, Laura B Westling, Ted Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title | Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title_full | Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title_fullStr | Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title_full_unstemmed | Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title_short | Invited Commentary: Demystifying Statistical Inference When Using Machine Learning in Causal Research |
title_sort | invited commentary: demystifying statistical inference when using machine learning in causal research |
topic | Invited Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10472326/ https://www.ncbi.nlm.nih.gov/pubmed/34268553 http://dx.doi.org/10.1093/aje/kwab200 |
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