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Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products

Panax ginseng products can be adulterated with materials from other Panax species. The purpose of this study is to provide a rapid P. ginseng authentication method for simultaneous identification of P. ginseng and detection of adulteration in ginseng products at different processing stages. First, a...

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Autores principales: Yang, Zhengxiu, Lo, Yat Tung, Quan, Zheng, He, Junchen, Chen, Yanjun, Faller, Adam, Chua, Tiffany, Wu, Hoi Yan, Zhang, Yanjun, Zou, Qiang, Li, Fan, Chang, Peter, Swanson, Gary, Shaw, Pang Chui, Lu, Zhengfei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10474259/
https://www.ncbi.nlm.nih.gov/pubmed/37658082
http://dx.doi.org/10.1038/s41598-023-39940-7
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author Yang, Zhengxiu
Lo, Yat Tung
Quan, Zheng
He, Junchen
Chen, Yanjun
Faller, Adam
Chua, Tiffany
Wu, Hoi Yan
Zhang, Yanjun
Zou, Qiang
Li, Fan
Chang, Peter
Swanson, Gary
Shaw, Pang Chui
Lu, Zhengfei
author_facet Yang, Zhengxiu
Lo, Yat Tung
Quan, Zheng
He, Junchen
Chen, Yanjun
Faller, Adam
Chua, Tiffany
Wu, Hoi Yan
Zhang, Yanjun
Zou, Qiang
Li, Fan
Chang, Peter
Swanson, Gary
Shaw, Pang Chui
Lu, Zhengfei
author_sort Yang, Zhengxiu
collection PubMed
description Panax ginseng products can be adulterated with materials from other Panax species. The purpose of this study is to provide a rapid P. ginseng authentication method for simultaneous identification of P. ginseng and detection of adulteration in ginseng products at different processing stages. First, a tetra-primer ARMS–PCR assay was designed based on a single-nucleotide polymorphism (SNP) within the trnL-trnF region and was tested at 28 PCR cycles with DNA extracted from Botanical Reference Materials (BRMs). Next, 5′ end random nucleotide and 3′ terminus phosphorothioates linkage modifications were incorporated into the inner primers to improve sensitivity and specificity at 40 PCR cycles. Finally, the modified assay was validated using characterized market ginseng materials and the detection limit was determined. The modified tetra-primer ARMS–PCR assay can achieve the desired sensitivity and specificity using one set of reaction conditions in ginseng materials at different stages. In validation, it was able to correctly identify target species P. ginseng and differentiate it from closely related species. This study suggests that the modified tetra-primer ARMS–PCR assay can be used for the rapid, species identity authentication of P. ginseng material in ginseng products. This assay can be used to complement chemical analytical methods in quality control, so both species identity and processing attributes of ginseng products can be efficiently addressed.
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spelling pubmed-104742592023-09-03 Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products Yang, Zhengxiu Lo, Yat Tung Quan, Zheng He, Junchen Chen, Yanjun Faller, Adam Chua, Tiffany Wu, Hoi Yan Zhang, Yanjun Zou, Qiang Li, Fan Chang, Peter Swanson, Gary Shaw, Pang Chui Lu, Zhengfei Sci Rep Article Panax ginseng products can be adulterated with materials from other Panax species. The purpose of this study is to provide a rapid P. ginseng authentication method for simultaneous identification of P. ginseng and detection of adulteration in ginseng products at different processing stages. First, a tetra-primer ARMS–PCR assay was designed based on a single-nucleotide polymorphism (SNP) within the trnL-trnF region and was tested at 28 PCR cycles with DNA extracted from Botanical Reference Materials (BRMs). Next, 5′ end random nucleotide and 3′ terminus phosphorothioates linkage modifications were incorporated into the inner primers to improve sensitivity and specificity at 40 PCR cycles. Finally, the modified assay was validated using characterized market ginseng materials and the detection limit was determined. The modified tetra-primer ARMS–PCR assay can achieve the desired sensitivity and specificity using one set of reaction conditions in ginseng materials at different stages. In validation, it was able to correctly identify target species P. ginseng and differentiate it from closely related species. This study suggests that the modified tetra-primer ARMS–PCR assay can be used for the rapid, species identity authentication of P. ginseng material in ginseng products. This assay can be used to complement chemical analytical methods in quality control, so both species identity and processing attributes of ginseng products can be efficiently addressed. Nature Publishing Group UK 2023-09-01 /pmc/articles/PMC10474259/ /pubmed/37658082 http://dx.doi.org/10.1038/s41598-023-39940-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yang, Zhengxiu
Lo, Yat Tung
Quan, Zheng
He, Junchen
Chen, Yanjun
Faller, Adam
Chua, Tiffany
Wu, Hoi Yan
Zhang, Yanjun
Zou, Qiang
Li, Fan
Chang, Peter
Swanson, Gary
Shaw, Pang Chui
Lu, Zhengfei
Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title_full Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title_fullStr Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title_full_unstemmed Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title_short Application of a modified tetra-primer ARMS–PCR assay for rapid Panax species identity authentication in ginseng products
title_sort application of a modified tetra-primer arms–pcr assay for rapid panax species identity authentication in ginseng products
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10474259/
https://www.ncbi.nlm.nih.gov/pubmed/37658082
http://dx.doi.org/10.1038/s41598-023-39940-7
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