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Operando Modeling of Zeolite-Catalyzed Reactions Using First-Principles Molecular Dynamics Simulations
[Image: see text] Within this Perspective, we critically reflect on the role of first-principles molecular dynamics (MD) simulations in unraveling the catalytic function within zeolites under operating conditions. First-principles MD simulations refer to methods where the dynamics of the nuclei is f...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10476167/ https://www.ncbi.nlm.nih.gov/pubmed/37671178 http://dx.doi.org/10.1021/acscatal.3c01945 |
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author | Van Speybroeck, Veronique Bocus, Massimo Cnudde, Pieter Vanduyfhuys, Louis |
author_facet | Van Speybroeck, Veronique Bocus, Massimo Cnudde, Pieter Vanduyfhuys, Louis |
author_sort | Van Speybroeck, Veronique |
collection | PubMed |
description | [Image: see text] Within this Perspective, we critically reflect on the role of first-principles molecular dynamics (MD) simulations in unraveling the catalytic function within zeolites under operating conditions. First-principles MD simulations refer to methods where the dynamics of the nuclei is followed in time by integrating the Newtonian equations of motion on a potential energy surface that is determined by solving the quantum-mechanical many-body problem for the electrons. Catalytic solids used in industrial applications show an intriguing high degree of complexity, with phenomena taking place at a broad range of length and time scales. Additionally, the state and function of a catalyst critically depend on the operating conditions, such as temperature, moisture, presence of water, etc. Herein we show by means of a series of exemplary cases how first-principles MD simulations are instrumental to unravel the catalyst complexity at the molecular scale. Examples show how the nature of reactive species at higher catalytic temperatures may drastically change compared to species at lower temperatures and how the nature of active sites may dynamically change upon exposure to water. To simulate rare events, first-principles MD simulations need to be used in combination with enhanced sampling techniques to efficiently sample low-probability regions of phase space. Using these techniques, it is shown how competitive pathways at operating conditions can be discovered and how broad transition state regions can be explored. Interestingly, such simulations can also be used to study hindered diffusion under operating conditions. The cases shown clearly illustrate how first-principles MD simulations reveal insights into the catalytic function at operating conditions, which could not be discovered using static or local approaches where only a few points are considered on the potential energy surface (PES). Despite these advantages, some major hurdles still exist to fully integrate first-principles MD methods in a standard computational catalytic workflow or to use the output of MD simulations as input for multiple length/time scale methods that aim to bridge to the reactor scale. First of all, methods are needed that allow us to evaluate the interatomic forces with quantum-mechanical accuracy, albeit at a much lower computational cost compared to currently used density functional theory (DFT) methods. The use of DFT limits the currently attainable length/time scales to hundreds of picoseconds and a few nanometers, which are much smaller than realistic catalyst particle dimensions and time scales encountered in the catalysis process. One solution could be to construct machine learning potentials (MLPs), where a numerical potential is derived from underlying quantum-mechanical data, which could be used in subsequent MD simulations. As such, much longer length and time scales could be reached; however, quite some research is still necessary to construct MLPs for the complex systems encountered in industrially used catalysts. Second, most currently used enhanced sampling techniques in catalysis make use of collective variables (CVs), which are mostly determined based on chemical intuition. To explore complex reactive networks with MD simulations, methods are needed that allow the automatic discovery of CVs or methods that do not rely on a priori definition of CVs. Recently, various data-driven methods have been proposed, which could be explored for complex catalytic systems. Lastly, first-principles MD methods are currently mostly used to investigate local reactive events. We hope that with the rise of data-driven methods and more efficient methods to describe the PES, first-principles MD methods will in the future also be able to describe longer length/time scale processes in catalysis. This might lead to a consistent dynamic description of all steps—diffusion, adsorption, and reaction—as they take place at the catalyst particle level. |
format | Online Article Text |
id | pubmed-10476167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-104761672023-09-05 Operando Modeling of Zeolite-Catalyzed Reactions Using First-Principles Molecular Dynamics Simulations Van Speybroeck, Veronique Bocus, Massimo Cnudde, Pieter Vanduyfhuys, Louis ACS Catal [Image: see text] Within this Perspective, we critically reflect on the role of first-principles molecular dynamics (MD) simulations in unraveling the catalytic function within zeolites under operating conditions. First-principles MD simulations refer to methods where the dynamics of the nuclei is followed in time by integrating the Newtonian equations of motion on a potential energy surface that is determined by solving the quantum-mechanical many-body problem for the electrons. Catalytic solids used in industrial applications show an intriguing high degree of complexity, with phenomena taking place at a broad range of length and time scales. Additionally, the state and function of a catalyst critically depend on the operating conditions, such as temperature, moisture, presence of water, etc. Herein we show by means of a series of exemplary cases how first-principles MD simulations are instrumental to unravel the catalyst complexity at the molecular scale. Examples show how the nature of reactive species at higher catalytic temperatures may drastically change compared to species at lower temperatures and how the nature of active sites may dynamically change upon exposure to water. To simulate rare events, first-principles MD simulations need to be used in combination with enhanced sampling techniques to efficiently sample low-probability regions of phase space. Using these techniques, it is shown how competitive pathways at operating conditions can be discovered and how broad transition state regions can be explored. Interestingly, such simulations can also be used to study hindered diffusion under operating conditions. The cases shown clearly illustrate how first-principles MD simulations reveal insights into the catalytic function at operating conditions, which could not be discovered using static or local approaches where only a few points are considered on the potential energy surface (PES). Despite these advantages, some major hurdles still exist to fully integrate first-principles MD methods in a standard computational catalytic workflow or to use the output of MD simulations as input for multiple length/time scale methods that aim to bridge to the reactor scale. First of all, methods are needed that allow us to evaluate the interatomic forces with quantum-mechanical accuracy, albeit at a much lower computational cost compared to currently used density functional theory (DFT) methods. The use of DFT limits the currently attainable length/time scales to hundreds of picoseconds and a few nanometers, which are much smaller than realistic catalyst particle dimensions and time scales encountered in the catalysis process. One solution could be to construct machine learning potentials (MLPs), where a numerical potential is derived from underlying quantum-mechanical data, which could be used in subsequent MD simulations. As such, much longer length and time scales could be reached; however, quite some research is still necessary to construct MLPs for the complex systems encountered in industrially used catalysts. Second, most currently used enhanced sampling techniques in catalysis make use of collective variables (CVs), which are mostly determined based on chemical intuition. To explore complex reactive networks with MD simulations, methods are needed that allow the automatic discovery of CVs or methods that do not rely on a priori definition of CVs. Recently, various data-driven methods have been proposed, which could be explored for complex catalytic systems. Lastly, first-principles MD methods are currently mostly used to investigate local reactive events. We hope that with the rise of data-driven methods and more efficient methods to describe the PES, first-principles MD methods will in the future also be able to describe longer length/time scale processes in catalysis. This might lead to a consistent dynamic description of all steps—diffusion, adsorption, and reaction—as they take place at the catalyst particle level. American Chemical Society 2023-08-15 /pmc/articles/PMC10476167/ /pubmed/37671178 http://dx.doi.org/10.1021/acscatal.3c01945 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Van Speybroeck, Veronique Bocus, Massimo Cnudde, Pieter Vanduyfhuys, Louis Operando Modeling of Zeolite-Catalyzed Reactions Using First-Principles Molecular Dynamics Simulations |
title | Operando Modeling of Zeolite-Catalyzed Reactions Using
First-Principles Molecular Dynamics Simulations |
title_full | Operando Modeling of Zeolite-Catalyzed Reactions Using
First-Principles Molecular Dynamics Simulations |
title_fullStr | Operando Modeling of Zeolite-Catalyzed Reactions Using
First-Principles Molecular Dynamics Simulations |
title_full_unstemmed | Operando Modeling of Zeolite-Catalyzed Reactions Using
First-Principles Molecular Dynamics Simulations |
title_short | Operando Modeling of Zeolite-Catalyzed Reactions Using
First-Principles Molecular Dynamics Simulations |
title_sort | operando modeling of zeolite-catalyzed reactions using
first-principles molecular dynamics simulations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10476167/ https://www.ncbi.nlm.nih.gov/pubmed/37671178 http://dx.doi.org/10.1021/acscatal.3c01945 |
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