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PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering

We are witnessing an acceleration of the global drive to converge consumption and production patterns towards a more circular and sustainable approach to the food system. To address the challenge of reconnecting agriculture, environment, food and health, collections of large datasets must be exploit...

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Autores principales: Weber, Magalie, Buche, Patrice, Ibanescu, Liliana, Dervaux, Stéphane, Guillemin, Hervé, Cufi, Julien, Visalli, Michel, Guichard, Elisabeth, Pénicaud, Caroline
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10477341/
https://www.ncbi.nlm.nih.gov/pubmed/37666867
http://dx.doi.org/10.1038/s41538-023-00221-2
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author Weber, Magalie
Buche, Patrice
Ibanescu, Liliana
Dervaux, Stéphane
Guillemin, Hervé
Cufi, Julien
Visalli, Michel
Guichard, Elisabeth
Pénicaud, Caroline
author_facet Weber, Magalie
Buche, Patrice
Ibanescu, Liliana
Dervaux, Stéphane
Guillemin, Hervé
Cufi, Julien
Visalli, Michel
Guichard, Elisabeth
Pénicaud, Caroline
author_sort Weber, Magalie
collection PubMed
description We are witnessing an acceleration of the global drive to converge consumption and production patterns towards a more circular and sustainable approach to the food system. To address the challenge of reconnecting agriculture, environment, food and health, collections of large datasets must be exploited. However, building high-capacity data-sharing networks means unlocking the information silos that are caused by a multiplicity of local data dictionaries. To solve the data harmonization problem, we proposed an ontology on food, feed, bioproducts, and biowastes engineering for data integration in a circular bioeconomy and nexus-oriented approach. This ontology is based on a core model representing a generic process, the Process and Observation Ontology (PO2), which has been specialized to provide the vocabulary necessary to describe any biomass transformation process and to characterize the food, bioproducts, and wastes derived from these processes. Much of this vocabulary comes from transforming authoritative references such as the European food classification system (FoodEx2), the European Waste Catalogue, and other international nomenclatures into a semantic, world wide web consortium (W3C) format that provides system interoperability and software-driven intelligence. We showed the relevance of this new domain ontology PO2/TransformON through several concrete use cases in the fields of process engineering, bio-based composite making, food ecodesign, and relations with consumer’s perception and preferences. Further works will aim to align with other ontologies to create an ontology network for bridging the gap between upstream and downstream processes in the food system.
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spelling pubmed-104773412023-09-06 PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering Weber, Magalie Buche, Patrice Ibanescu, Liliana Dervaux, Stéphane Guillemin, Hervé Cufi, Julien Visalli, Michel Guichard, Elisabeth Pénicaud, Caroline NPJ Sci Food Article We are witnessing an acceleration of the global drive to converge consumption and production patterns towards a more circular and sustainable approach to the food system. To address the challenge of reconnecting agriculture, environment, food and health, collections of large datasets must be exploited. However, building high-capacity data-sharing networks means unlocking the information silos that are caused by a multiplicity of local data dictionaries. To solve the data harmonization problem, we proposed an ontology on food, feed, bioproducts, and biowastes engineering for data integration in a circular bioeconomy and nexus-oriented approach. This ontology is based on a core model representing a generic process, the Process and Observation Ontology (PO2), which has been specialized to provide the vocabulary necessary to describe any biomass transformation process and to characterize the food, bioproducts, and wastes derived from these processes. Much of this vocabulary comes from transforming authoritative references such as the European food classification system (FoodEx2), the European Waste Catalogue, and other international nomenclatures into a semantic, world wide web consortium (W3C) format that provides system interoperability and software-driven intelligence. We showed the relevance of this new domain ontology PO2/TransformON through several concrete use cases in the fields of process engineering, bio-based composite making, food ecodesign, and relations with consumer’s perception and preferences. Further works will aim to align with other ontologies to create an ontology network for bridging the gap between upstream and downstream processes in the food system. Nature Publishing Group UK 2023-09-04 /pmc/articles/PMC10477341/ /pubmed/37666867 http://dx.doi.org/10.1038/s41538-023-00221-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Weber, Magalie
Buche, Patrice
Ibanescu, Liliana
Dervaux, Stéphane
Guillemin, Hervé
Cufi, Julien
Visalli, Michel
Guichard, Elisabeth
Pénicaud, Caroline
PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title_full PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title_fullStr PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title_full_unstemmed PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title_short PO2/TransformON, an ontology for data integration on food, feed, bioproducts and biowaste engineering
title_sort po2/transformon, an ontology for data integration on food, feed, bioproducts and biowaste engineering
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10477341/
https://www.ncbi.nlm.nih.gov/pubmed/37666867
http://dx.doi.org/10.1038/s41538-023-00221-2
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