Cargando…

Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail

Several factors affect the passive membrane permeation of small molecules, including size, charge, pH, or the presence of specific chemical groups. Understanding these features is paramount to identifying or designing drug candidates with optimal ADMET properties and this can be achieved through exp...

Descripción completa

Detalles Bibliográficos
Autores principales: Gomes, André M.M., Costa, Paulo J., Machuqueiro, Miguel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10477461/
https://www.ncbi.nlm.nih.gov/pubmed/37675199
http://dx.doi.org/10.1016/j.bbadva.2023.100099
_version_ 1785101155067494400
author Gomes, André M.M.
Costa, Paulo J.
Machuqueiro, Miguel
author_facet Gomes, André M.M.
Costa, Paulo J.
Machuqueiro, Miguel
author_sort Gomes, André M.M.
collection PubMed
description Several factors affect the passive membrane permeation of small molecules, including size, charge, pH, or the presence of specific chemical groups. Understanding these features is paramount to identifying or designing drug candidates with optimal ADMET properties and this can be achieved through experimental/knowledge-based methodologies or using computational approaches. Empirical methods often lack detailed information about the underlying molecular mechanism. In contrast, Molecular Dynamics-based approaches are a powerful strategy, providing an atomistic description of this process. This technique is continuously growing, featuring new related methodologies. In this work, the recent advances in this research area will be discussed.
format Online
Article
Text
id pubmed-10477461
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-104774612023-09-06 Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail Gomes, André M.M. Costa, Paulo J. Machuqueiro, Miguel BBA Adv Research Article Several factors affect the passive membrane permeation of small molecules, including size, charge, pH, or the presence of specific chemical groups. Understanding these features is paramount to identifying or designing drug candidates with optimal ADMET properties and this can be achieved through experimental/knowledge-based methodologies or using computational approaches. Empirical methods often lack detailed information about the underlying molecular mechanism. In contrast, Molecular Dynamics-based approaches are a powerful strategy, providing an atomistic description of this process. This technique is continuously growing, featuring new related methodologies. In this work, the recent advances in this research area will be discussed. Elsevier 2023-08-16 /pmc/articles/PMC10477461/ /pubmed/37675199 http://dx.doi.org/10.1016/j.bbadva.2023.100099 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Gomes, André M.M.
Costa, Paulo J.
Machuqueiro, Miguel
Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title_full Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title_fullStr Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title_full_unstemmed Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title_short Recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
title_sort recent advances on molecular dynamics-based techniques to address drug membrane permeability with atomistic detail
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10477461/
https://www.ncbi.nlm.nih.gov/pubmed/37675199
http://dx.doi.org/10.1016/j.bbadva.2023.100099
work_keys_str_mv AT gomesandremm recentadvancesonmoleculardynamicsbasedtechniquestoaddressdrugmembranepermeabilitywithatomisticdetail
AT costapauloj recentadvancesonmoleculardynamicsbasedtechniquestoaddressdrugmembranepermeabilitywithatomisticdetail
AT machuqueiromiguel recentadvancesonmoleculardynamicsbasedtechniquestoaddressdrugmembranepermeabilitywithatomisticdetail