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Which resolution?

The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients giv...

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Detalles Bibliográficos
Autor principal: Nave, Colin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10478518/
https://www.ncbi.nlm.nih.gov/pubmed/37668217
http://dx.doi.org/10.1107/S205225252300698X
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author Nave, Colin
author_facet Nave, Colin
author_sort Nave, Colin
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description The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients give a reasonable indication of the quality of the corresponding electron density. For X-ray imaging of biological materials such as cells and soft tissue, the wide range of contrast of the features means that intensity based correlation coefficients can give a poor indication of the interpretability of an image. Rather than the term resolution, it is the contrast to noise ratio for a feature of interest at the relevant spatial frequency that is more relevant. Additional metrics are required to describe the quality of an image, and these are discussed.
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spelling pubmed-104785182023-09-06 Which resolution? Nave, Colin IUCrJ Research Papers The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients give a reasonable indication of the quality of the corresponding electron density. For X-ray imaging of biological materials such as cells and soft tissue, the wide range of contrast of the features means that intensity based correlation coefficients can give a poor indication of the interpretability of an image. Rather than the term resolution, it is the contrast to noise ratio for a feature of interest at the relevant spatial frequency that is more relevant. Additional metrics are required to describe the quality of an image, and these are discussed. International Union of Crystallography 2023-09-01 /pmc/articles/PMC10478518/ /pubmed/37668217 http://dx.doi.org/10.1107/S205225252300698X Text en © Colin Nave 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Nave, Colin
Which resolution?
title Which resolution?
title_full Which resolution?
title_fullStr Which resolution?
title_full_unstemmed Which resolution?
title_short Which resolution?
title_sort which resolution?
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10478518/
https://www.ncbi.nlm.nih.gov/pubmed/37668217
http://dx.doi.org/10.1107/S205225252300698X
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