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Which resolution?
The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients giv...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10478518/ https://www.ncbi.nlm.nih.gov/pubmed/37668217 http://dx.doi.org/10.1107/S205225252300698X |
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author | Nave, Colin |
author_facet | Nave, Colin |
author_sort | Nave, Colin |
collection | PubMed |
description | The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients give a reasonable indication of the quality of the corresponding electron density. For X-ray imaging of biological materials such as cells and soft tissue, the wide range of contrast of the features means that intensity based correlation coefficients can give a poor indication of the interpretability of an image. Rather than the term resolution, it is the contrast to noise ratio for a feature of interest at the relevant spatial frequency that is more relevant. Additional metrics are required to describe the quality of an image, and these are discussed. |
format | Online Article Text |
id | pubmed-10478518 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-104785182023-09-06 Which resolution? Nave, Colin IUCrJ Research Papers The relationship between the contrast to noise ratio and intensity based cross-correlation coefficients for both protein crystallography and X-ray imaging are compared. It is concluded that, for protein crystallography at near atomic resolution, the intensity based cross-correlation coefficients give a reasonable indication of the quality of the corresponding electron density. For X-ray imaging of biological materials such as cells and soft tissue, the wide range of contrast of the features means that intensity based correlation coefficients can give a poor indication of the interpretability of an image. Rather than the term resolution, it is the contrast to noise ratio for a feature of interest at the relevant spatial frequency that is more relevant. Additional metrics are required to describe the quality of an image, and these are discussed. International Union of Crystallography 2023-09-01 /pmc/articles/PMC10478518/ /pubmed/37668217 http://dx.doi.org/10.1107/S205225252300698X Text en © Colin Nave 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Nave, Colin Which resolution? |
title | Which resolution? |
title_full | Which resolution? |
title_fullStr | Which resolution? |
title_full_unstemmed | Which resolution? |
title_short | Which resolution? |
title_sort | which resolution? |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10478518/ https://www.ncbi.nlm.nih.gov/pubmed/37668217 http://dx.doi.org/10.1107/S205225252300698X |
work_keys_str_mv | AT navecolin whichresolution |