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The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas

Aeromonas is one of the most serious pathogens in freshwater aquaculture. Overuse of antibiotics for the treatment of fish diseases has led to the frequent occurrence of drug-resistant strains. Phage therapy is an alternative approach to overcoming the multi-drug resistance associated with antibioti...

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Autores principales: Ye, Yingying, Tong, Guixiang, Chen, Gonghao, Huang, Lixing, Huang, Liqiang, Jiang, Xinglong, Wei, Xinxian, Lin, Mao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10480305/
https://www.ncbi.nlm.nih.gov/pubmed/37579848
http://dx.doi.org/10.1016/j.virusres.2023.199193
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author Ye, Yingying
Tong, Guixiang
Chen, Gonghao
Huang, Lixing
Huang, Liqiang
Jiang, Xinglong
Wei, Xinxian
Lin, Mao
author_facet Ye, Yingying
Tong, Guixiang
Chen, Gonghao
Huang, Lixing
Huang, Liqiang
Jiang, Xinglong
Wei, Xinxian
Lin, Mao
author_sort Ye, Yingying
collection PubMed
description Aeromonas is one of the most serious pathogens in freshwater aquaculture. Overuse of antibiotics for the treatment of fish diseases has led to the frequent occurrence of drug-resistant strains. Phage therapy is an alternative approach to overcoming the multi-drug resistance associated with antibiotics. In this study, a novel phage phiA034 targeting the host A. veronii A034 was isolated. The phage could infect 14 strains of 4 species Aeromonas. The phage phiA034 displayed head-tail structure with an icosahedral head in the TEM image. At the optimal MOI of 1, it had a latent period of nearly 20 minutes and a burst size of 286 PFU/cell. Besides, the phage phiA034 exhibited high tolerance to a wide range of temperature (30–70 °C) and acid-base (pH 6.0–10.0). The whole genome of phage phiA034 was sequenced with a size of 61,443 bp and annotated with 82 ORFs, mainly related to structure, DNA replication, and lysis. Based on the analysis and comparison of the genomes and proteomes, phage phiA034 could be classified as a novel species of an existing genus Duplodnaviria Heunggongvirae, Uroviricota, Caudoviricetes, Casjensviridae, Sharonstreetvirus. These findings have expanded the species bank and genomes library of bacterial virus and will promote the application of phage therapy in Aeromonas disease.
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spelling pubmed-104803052023-09-07 The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas Ye, Yingying Tong, Guixiang Chen, Gonghao Huang, Lixing Huang, Liqiang Jiang, Xinglong Wei, Xinxian Lin, Mao Virus Res Article Aeromonas is one of the most serious pathogens in freshwater aquaculture. Overuse of antibiotics for the treatment of fish diseases has led to the frequent occurrence of drug-resistant strains. Phage therapy is an alternative approach to overcoming the multi-drug resistance associated with antibiotics. In this study, a novel phage phiA034 targeting the host A. veronii A034 was isolated. The phage could infect 14 strains of 4 species Aeromonas. The phage phiA034 displayed head-tail structure with an icosahedral head in the TEM image. At the optimal MOI of 1, it had a latent period of nearly 20 minutes and a burst size of 286 PFU/cell. Besides, the phage phiA034 exhibited high tolerance to a wide range of temperature (30–70 °C) and acid-base (pH 6.0–10.0). The whole genome of phage phiA034 was sequenced with a size of 61,443 bp and annotated with 82 ORFs, mainly related to structure, DNA replication, and lysis. Based on the analysis and comparison of the genomes and proteomes, phage phiA034 could be classified as a novel species of an existing genus Duplodnaviria Heunggongvirae, Uroviricota, Caudoviricetes, Casjensviridae, Sharonstreetvirus. These findings have expanded the species bank and genomes library of bacterial virus and will promote the application of phage therapy in Aeromonas disease. Elsevier 2023-08-29 /pmc/articles/PMC10480305/ /pubmed/37579848 http://dx.doi.org/10.1016/j.virusres.2023.199193 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).
spellingShingle Article
Ye, Yingying
Tong, Guixiang
Chen, Gonghao
Huang, Lixing
Huang, Liqiang
Jiang, Xinglong
Wei, Xinxian
Lin, Mao
The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title_full The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title_fullStr The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title_full_unstemmed The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title_short The characterization and genome analysis of a novel phage phiA034 targeting multiple species of Aeromonas
title_sort characterization and genome analysis of a novel phage phia034 targeting multiple species of aeromonas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10480305/
https://www.ncbi.nlm.nih.gov/pubmed/37579848
http://dx.doi.org/10.1016/j.virusres.2023.199193
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