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Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10482814/ https://www.ncbi.nlm.nih.gov/pubmed/37672121 http://dx.doi.org/10.1186/s43141-023-00543-4 |
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author | Abd-dada, Hassane Bouda, Said Khachtib, Youssef Bella, Youssef Ait Haddioui, Abdelmajid |
author_facet | Abd-dada, Hassane Bouda, Said Khachtib, Youssef Bella, Youssef Ait Haddioui, Abdelmajid |
author_sort | Abd-dada, Hassane |
collection | PubMed |
description | BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers. Twelve natural populations collected from its geographical range in Morocco were analyzed using 14 ISSR primers. RESULTS: A total of 125 bands were obtained, with polymorphism of 74.81%. The polymorphic information content (PIC), resolving power (Rp), Shannon’s information index (I), and total genetic diversity (Ht) were 0.33, 2.8, 0.35, and 0.21, respectively. The analysis of molecular variance showed that 75.56% of the total variability is present within populations and that 24.44% exists among populations. Also, the analysis showed a very low genetic differentiation between groups of mountain range type (FCT = 0.066), mountain versant type groups (FCT = −0.024), and altitude groups (FCT = −0.022). Moreover, the geographical distances between populations are correlated with their corresponding genetic distances according to the Mantel test (r = 0.507; P < 0.0001). CONCLUSION: These results suggest that the population structuring follows a model of isolation by geographical distance. Indeed, the genetic structuring of populations into two groups obtained from PCoA and structure analysis revealed a dependence on the geographical origin of the populations. By contrast, the genetic distances are not correlated with the altitude. |
format | Online Article Text |
id | pubmed-10482814 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-104828142023-09-08 Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) Abd-dada, Hassane Bouda, Said Khachtib, Youssef Bella, Youssef Ait Haddioui, Abdelmajid J Genet Eng Biotechnol Research BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers. Twelve natural populations collected from its geographical range in Morocco were analyzed using 14 ISSR primers. RESULTS: A total of 125 bands were obtained, with polymorphism of 74.81%. The polymorphic information content (PIC), resolving power (Rp), Shannon’s information index (I), and total genetic diversity (Ht) were 0.33, 2.8, 0.35, and 0.21, respectively. The analysis of molecular variance showed that 75.56% of the total variability is present within populations and that 24.44% exists among populations. Also, the analysis showed a very low genetic differentiation between groups of mountain range type (FCT = 0.066), mountain versant type groups (FCT = −0.024), and altitude groups (FCT = −0.022). Moreover, the geographical distances between populations are correlated with their corresponding genetic distances according to the Mantel test (r = 0.507; P < 0.0001). CONCLUSION: These results suggest that the population structuring follows a model of isolation by geographical distance. Indeed, the genetic structuring of populations into two groups obtained from PCoA and structure analysis revealed a dependence on the geographical origin of the populations. By contrast, the genetic distances are not correlated with the altitude. Springer Berlin Heidelberg 2023-09-06 /pmc/articles/PMC10482814/ /pubmed/37672121 http://dx.doi.org/10.1186/s43141-023-00543-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Abd-dada, Hassane Bouda, Said Khachtib, Youssef Bella, Youssef Ait Haddioui, Abdelmajid Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title | Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title_full | Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title_fullStr | Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title_full_unstemmed | Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title_short | Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) |
title_sort | use of issr markers to assess the genetic diversity of an endemic plant of morocco (euphorbia resinifera o. berg) |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10482814/ https://www.ncbi.nlm.nih.gov/pubmed/37672121 http://dx.doi.org/10.1186/s43141-023-00543-4 |
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