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Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)

BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers...

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Autores principales: Abd-dada, Hassane, Bouda, Said, Khachtib, Youssef, Bella, Youssef Ait, Haddioui, Abdelmajid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10482814/
https://www.ncbi.nlm.nih.gov/pubmed/37672121
http://dx.doi.org/10.1186/s43141-023-00543-4
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author Abd-dada, Hassane
Bouda, Said
Khachtib, Youssef
Bella, Youssef Ait
Haddioui, Abdelmajid
author_facet Abd-dada, Hassane
Bouda, Said
Khachtib, Youssef
Bella, Youssef Ait
Haddioui, Abdelmajid
author_sort Abd-dada, Hassane
collection PubMed
description BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers. Twelve natural populations collected from its geographical range in Morocco were analyzed using 14 ISSR primers. RESULTS: A total of 125 bands were obtained, with polymorphism of 74.81%. The polymorphic information content (PIC), resolving power (Rp), Shannon’s information index (I), and total genetic diversity (Ht) were 0.33, 2.8, 0.35, and 0.21, respectively. The analysis of molecular variance showed that 75.56% of the total variability is present within populations and that 24.44% exists among populations. Also, the analysis showed a very low genetic differentiation between groups of mountain range type (FCT = 0.066), mountain versant type groups (FCT =  −0.024), and altitude groups (FCT =  −0.022). Moreover, the geographical distances between populations are correlated with their corresponding genetic distances according to the Mantel test (r = 0.507; P < 0.0001). CONCLUSION: These results suggest that the population structuring follows a model of isolation by geographical distance. Indeed, the genetic structuring of populations into two groups obtained from PCoA and structure analysis revealed a dependence on the geographical origin of the populations. By contrast, the genetic distances are not correlated with the altitude.
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spelling pubmed-104828142023-09-08 Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg) Abd-dada, Hassane Bouda, Said Khachtib, Youssef Bella, Youssef Ait Haddioui, Abdelmajid J Genet Eng Biotechnol Research BACKGROUND: Euphorbia resinifera is a melliferous, medicinal, and endemic plant to Morocco. Nevertheless, its ecological and genetic diversity still unknown. The objective of this study is to analyze the diversity and genetic structure of Moroccan wild populations of E. resinifera using ISSR markers. Twelve natural populations collected from its geographical range in Morocco were analyzed using 14 ISSR primers. RESULTS: A total of 125 bands were obtained, with polymorphism of 74.81%. The polymorphic information content (PIC), resolving power (Rp), Shannon’s information index (I), and total genetic diversity (Ht) were 0.33, 2.8, 0.35, and 0.21, respectively. The analysis of molecular variance showed that 75.56% of the total variability is present within populations and that 24.44% exists among populations. Also, the analysis showed a very low genetic differentiation between groups of mountain range type (FCT = 0.066), mountain versant type groups (FCT =  −0.024), and altitude groups (FCT =  −0.022). Moreover, the geographical distances between populations are correlated with their corresponding genetic distances according to the Mantel test (r = 0.507; P < 0.0001). CONCLUSION: These results suggest that the population structuring follows a model of isolation by geographical distance. Indeed, the genetic structuring of populations into two groups obtained from PCoA and structure analysis revealed a dependence on the geographical origin of the populations. By contrast, the genetic distances are not correlated with the altitude. Springer Berlin Heidelberg 2023-09-06 /pmc/articles/PMC10482814/ /pubmed/37672121 http://dx.doi.org/10.1186/s43141-023-00543-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
Abd-dada, Hassane
Bouda, Said
Khachtib, Youssef
Bella, Youssef Ait
Haddioui, Abdelmajid
Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title_full Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title_fullStr Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title_full_unstemmed Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title_short Use of ISSR markers to assess the genetic diversity of an endemic plant of Morocco (Euphorbia resinifera O. Berg)
title_sort use of issr markers to assess the genetic diversity of an endemic plant of morocco (euphorbia resinifera o. berg)
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10482814/
https://www.ncbi.nlm.nih.gov/pubmed/37672121
http://dx.doi.org/10.1186/s43141-023-00543-4
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