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Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples

[Image: see text] Several developments over the last few years are being directed toward improving DNA-based analysis to simplify, miniaturize, and reduce the time and cost of analysis, with the objective to allow its use in decentralized settings. One of the most interesting fields is DNA extractio...

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Autores principales: Teixeira, Carla, Ipatov, Andrey, Carvalho, Joana, Purwidyantri, Agnes, Fontes, Natacha, Prado, Marta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10483517/
https://www.ncbi.nlm.nih.gov/pubmed/37692237
http://dx.doi.org/10.1021/acsomega.3c02717
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author Teixeira, Carla
Ipatov, Andrey
Carvalho, Joana
Purwidyantri, Agnes
Fontes, Natacha
Prado, Marta
author_facet Teixeira, Carla
Ipatov, Andrey
Carvalho, Joana
Purwidyantri, Agnes
Fontes, Natacha
Prado, Marta
author_sort Teixeira, Carla
collection PubMed
description [Image: see text] Several developments over the last few years are being directed toward improving DNA-based analysis to simplify, miniaturize, and reduce the time and cost of analysis, with the objective to allow its use in decentralized settings. One of the most interesting fields is DNA extraction and purification, a key step for ensuring good analytical performance. In this sense, microscale solid phase extraction (μSPE) offers paramount advantages for an improved DNA yield. In this work, we have developed a miniaturized module for DNA purification based on μSPE using a borosilicate glass microfiber filter as the solid phase. We also established a protocol for highly efficient DNA purification from vegetable samples, including leaves and grapes from four different varieties from the PDO Douro and two varieties from the Minho wine regions. The protocol demonstrated excellent performance when compared with a commercial kit with a DNA recovery yield of around 50%.
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spelling pubmed-104835172023-09-08 Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples Teixeira, Carla Ipatov, Andrey Carvalho, Joana Purwidyantri, Agnes Fontes, Natacha Prado, Marta ACS Omega [Image: see text] Several developments over the last few years are being directed toward improving DNA-based analysis to simplify, miniaturize, and reduce the time and cost of analysis, with the objective to allow its use in decentralized settings. One of the most interesting fields is DNA extraction and purification, a key step for ensuring good analytical performance. In this sense, microscale solid phase extraction (μSPE) offers paramount advantages for an improved DNA yield. In this work, we have developed a miniaturized module for DNA purification based on μSPE using a borosilicate glass microfiber filter as the solid phase. We also established a protocol for highly efficient DNA purification from vegetable samples, including leaves and grapes from four different varieties from the PDO Douro and two varieties from the Minho wine regions. The protocol demonstrated excellent performance when compared with a commercial kit with a DNA recovery yield of around 50%. American Chemical Society 2023-08-24 /pmc/articles/PMC10483517/ /pubmed/37692237 http://dx.doi.org/10.1021/acsomega.3c02717 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Teixeira, Carla
Ipatov, Andrey
Carvalho, Joana
Purwidyantri, Agnes
Fontes, Natacha
Prado, Marta
Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title_full Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title_fullStr Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title_full_unstemmed Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title_short Miniaturized Microscale Solid-Phase Extraction-Based Module for Highly Efficient DNA Extraction and Purification from Grapevine Samples
title_sort miniaturized microscale solid-phase extraction-based module for highly efficient dna extraction and purification from grapevine samples
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10483517/
https://www.ncbi.nlm.nih.gov/pubmed/37692237
http://dx.doi.org/10.1021/acsomega.3c02717
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