RNA sequencing transcriptomics and metabolomics in three poultry breeds

Chickens are remarkably versatile animals that are used as model organisms for biomedical research. Here, we performed metabolomic and RNA sequencing (RNA-Seq) transcriptomic analyses of the hypothalamus, liver tissue and serum of poultry with different genetic backgrounds, providing detailed inform...

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Autores principales: Zhu, Qidong, Cai, Yuanli, Xiao, Chuanpi, Kong, Linglian, Pan, Xue, Song, Bochen, Song, Zhigang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Data Descriptor
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10484955/
https://www.ncbi.nlm.nih.gov/pubmed/37679362
http://dx.doi.org/10.1038/s41597-023-02505-4
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author Zhu, Qidong
Cai, Yuanli
Xiao, Chuanpi
Kong, Linglian
Pan, Xue
Song, Bochen
Song, Zhigang
author_facet Zhu, Qidong
Cai, Yuanli
Xiao, Chuanpi
Kong, Linglian
Pan, Xue
Song, Bochen
Song, Zhigang
author_sort Zhu, Qidong
collection PubMed
description Chickens are remarkably versatile animals that are used as model organisms for biomedical research. Here, we performed metabolomic and RNA sequencing (RNA-Seq) transcriptomic analyses of the hypothalamus, liver tissue and serum of poultry with different genetic backgrounds, providing detailed information for hypothalamus and liver tissue at the transcriptional level and for liver tissue and serum at the metabolite level. We present two datasets generated from 36 samples from three poultry breeds using high-throughput RNA-Seq and liquid chromatography coupled with mass spectrometry acquisition (LC/MS). The transcriptomic and metabolomic data obtained for poultry of different genetic backgrounds will be a valuable resource for further studies on this model organism.
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spelling pubmed-104849552023-09-09 RNA sequencing transcriptomics and metabolomics in three poultry breeds Zhu, Qidong Cai, Yuanli Xiao, Chuanpi Kong, Linglian Pan, Xue Song, Bochen Song, Zhigang Sci Data Data Descriptor Chickens are remarkably versatile animals that are used as model organisms for biomedical research. Here, we performed metabolomic and RNA sequencing (RNA-Seq) transcriptomic analyses of the hypothalamus, liver tissue and serum of poultry with different genetic backgrounds, providing detailed information for hypothalamus and liver tissue at the transcriptional level and for liver tissue and serum at the metabolite level. We present two datasets generated from 36 samples from three poultry breeds using high-throughput RNA-Seq and liquid chromatography coupled with mass spectrometry acquisition (LC/MS). The transcriptomic and metabolomic data obtained for poultry of different genetic backgrounds will be a valuable resource for further studies on this model organism. Nature Publishing Group UK 2023-09-07 /pmc/articles/PMC10484955/ /pubmed/37679362 http://dx.doi.org/10.1038/s41597-023-02505-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Zhu, Qidong
Cai, Yuanli
Xiao, Chuanpi
Kong, Linglian
Pan, Xue
Song, Bochen
Song, Zhigang
RNA sequencing transcriptomics and metabolomics in three poultry breeds
title RNA sequencing transcriptomics and metabolomics in three poultry breeds
title_full RNA sequencing transcriptomics and metabolomics in three poultry breeds
title_fullStr RNA sequencing transcriptomics and metabolomics in three poultry breeds
title_full_unstemmed RNA sequencing transcriptomics and metabolomics in three poultry breeds
title_short RNA sequencing transcriptomics and metabolomics in three poultry breeds
title_sort rna sequencing transcriptomics and metabolomics in three poultry breeds
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10484955/
https://www.ncbi.nlm.nih.gov/pubmed/37679362
http://dx.doi.org/10.1038/s41597-023-02505-4
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