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Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study
Bronchiolitis is the most common lower respiratory infection in infants, yet its pathobiology remains unclear. Here we present blood DNA methylation data from 625 infants hospitalized with bronchiolitis in a 17-center prospective study, and associate them with disease severity. We investigate differ...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10485022/ https://www.ncbi.nlm.nih.gov/pubmed/37679381 http://dx.doi.org/10.1038/s41467-023-41300-y |
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author | Zhu, Zhaozhong Li, Yijun Freishtat, Robert J. Celedón, Juan C. Espinola, Janice A. Harmon, Brennan Hahn, Andrea Camargo, Carlos A. Liang, Liming Hasegawa, Kohei |
author_facet | Zhu, Zhaozhong Li, Yijun Freishtat, Robert J. Celedón, Juan C. Espinola, Janice A. Harmon, Brennan Hahn, Andrea Camargo, Carlos A. Liang, Liming Hasegawa, Kohei |
author_sort | Zhu, Zhaozhong |
collection | PubMed |
description | Bronchiolitis is the most common lower respiratory infection in infants, yet its pathobiology remains unclear. Here we present blood DNA methylation data from 625 infants hospitalized with bronchiolitis in a 17-center prospective study, and associate them with disease severity. We investigate differentially methylated CpGs (DMCs) for disease severity. We characterize the DMCs based on their association with cell and tissues types, biological pathways, and gene expression. Lastly, we also examine the relationships of severity-related DMCs with respiratory and immune traits in independent cohorts. We identify 33 DMCs associated with severity. These DMCs are differentially methylated in blood immune cells. These DMCs are also significantly enriched in multiple tissues (e.g., lung) and cells (e.g., small airway epithelial cells), and biological pathways (e.g., interleukin-1-mediated signaling). Additionally, these DMCs are associated with respiratory and immune traits (e.g., asthma, lung function, IgE levels). Our study suggests the role of DNA methylation in bronchiolitis severity. |
format | Online Article Text |
id | pubmed-10485022 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104850222023-09-09 Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study Zhu, Zhaozhong Li, Yijun Freishtat, Robert J. Celedón, Juan C. Espinola, Janice A. Harmon, Brennan Hahn, Andrea Camargo, Carlos A. Liang, Liming Hasegawa, Kohei Nat Commun Article Bronchiolitis is the most common lower respiratory infection in infants, yet its pathobiology remains unclear. Here we present blood DNA methylation data from 625 infants hospitalized with bronchiolitis in a 17-center prospective study, and associate them with disease severity. We investigate differentially methylated CpGs (DMCs) for disease severity. We characterize the DMCs based on their association with cell and tissues types, biological pathways, and gene expression. Lastly, we also examine the relationships of severity-related DMCs with respiratory and immune traits in independent cohorts. We identify 33 DMCs associated with severity. These DMCs are differentially methylated in blood immune cells. These DMCs are also significantly enriched in multiple tissues (e.g., lung) and cells (e.g., small airway epithelial cells), and biological pathways (e.g., interleukin-1-mediated signaling). Additionally, these DMCs are associated with respiratory and immune traits (e.g., asthma, lung function, IgE levels). Our study suggests the role of DNA methylation in bronchiolitis severity. Nature Publishing Group UK 2023-09-07 /pmc/articles/PMC10485022/ /pubmed/37679381 http://dx.doi.org/10.1038/s41467-023-41300-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhu, Zhaozhong Li, Yijun Freishtat, Robert J. Celedón, Juan C. Espinola, Janice A. Harmon, Brennan Hahn, Andrea Camargo, Carlos A. Liang, Liming Hasegawa, Kohei Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title | Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title_full | Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title_fullStr | Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title_full_unstemmed | Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title_short | Epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
title_sort | epigenome-wide association analysis of infant bronchiolitis severity: a multicenter prospective cohort study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10485022/ https://www.ncbi.nlm.nih.gov/pubmed/37679381 http://dx.doi.org/10.1038/s41467-023-41300-y |
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