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An Improved Model for Biogenic Ammonium Urate
[Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns wi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10486279/ https://www.ncbi.nlm.nih.gov/pubmed/37692332 http://dx.doi.org/10.1021/acs.cgd.3c00789 |
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author | Thornton, Alyssa M. Fawcett, Timothy G. Kaduk, James A. Lin, YuJai Swift, Jennifer A. |
author_facet | Thornton, Alyssa M. Fawcett, Timothy G. Kaduk, James A. Lin, YuJai Swift, Jennifer A. |
author_sort | Thornton, Alyssa M. |
collection | PubMed |
description | [Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns with widely varying intensities. Using block Rietveld refinement methods of powder diffraction data, here we identify ammonium urate hydrate (AUH) as a likely component in natural uroliths. AUH has a planar 2-D hydrogen-bonded organic framework of urate ions separated by ammonium ions with water molecules residing in bisecting channels. AUH is stable up to 150 °C for short time periods but begins to decompose with prolonged heating times and/or at higher temperatures. Changes in the solid-state structure and composition of synthetic material over a temperature range from 25 to 300 °C are elucidated through thermogravimetric and spectroscopic data, combustion analysis, and time-resolved synchrotron powder X-ray diffraction studies. We contend that biogenic ammonium urate is more accurately modeled as a mixture of AUH and anhydrous ammonium urate, in ratios that can vary depending on the growth environment. The similar but not identical diffraction patterns of these two forms likely account for much of the variability seen in natural ammonium urate samples. |
format | Online Article Text |
id | pubmed-10486279 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-104862792023-09-09 An Improved Model for Biogenic Ammonium Urate Thornton, Alyssa M. Fawcett, Timothy G. Kaduk, James A. Lin, YuJai Swift, Jennifer A. Cryst Growth Des [Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns with widely varying intensities. Using block Rietveld refinement methods of powder diffraction data, here we identify ammonium urate hydrate (AUH) as a likely component in natural uroliths. AUH has a planar 2-D hydrogen-bonded organic framework of urate ions separated by ammonium ions with water molecules residing in bisecting channels. AUH is stable up to 150 °C for short time periods but begins to decompose with prolonged heating times and/or at higher temperatures. Changes in the solid-state structure and composition of synthetic material over a temperature range from 25 to 300 °C are elucidated through thermogravimetric and spectroscopic data, combustion analysis, and time-resolved synchrotron powder X-ray diffraction studies. We contend that biogenic ammonium urate is more accurately modeled as a mixture of AUH and anhydrous ammonium urate, in ratios that can vary depending on the growth environment. The similar but not identical diffraction patterns of these two forms likely account for much of the variability seen in natural ammonium urate samples. American Chemical Society 2023-08-16 /pmc/articles/PMC10486279/ /pubmed/37692332 http://dx.doi.org/10.1021/acs.cgd.3c00789 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Thornton, Alyssa M. Fawcett, Timothy G. Kaduk, James A. Lin, YuJai Swift, Jennifer A. An Improved Model for Biogenic Ammonium Urate |
title | An Improved Model
for Biogenic Ammonium Urate |
title_full | An Improved Model
for Biogenic Ammonium Urate |
title_fullStr | An Improved Model
for Biogenic Ammonium Urate |
title_full_unstemmed | An Improved Model
for Biogenic Ammonium Urate |
title_short | An Improved Model
for Biogenic Ammonium Urate |
title_sort | improved model
for biogenic ammonium urate |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10486279/ https://www.ncbi.nlm.nih.gov/pubmed/37692332 http://dx.doi.org/10.1021/acs.cgd.3c00789 |
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