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An Improved Model for Biogenic Ammonium Urate

[Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns wi...

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Autores principales: Thornton, Alyssa M., Fawcett, Timothy G., Kaduk, James A., Lin, YuJai, Swift, Jennifer A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10486279/
https://www.ncbi.nlm.nih.gov/pubmed/37692332
http://dx.doi.org/10.1021/acs.cgd.3c00789
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author Thornton, Alyssa M.
Fawcett, Timothy G.
Kaduk, James A.
Lin, YuJai
Swift, Jennifer A.
author_facet Thornton, Alyssa M.
Fawcett, Timothy G.
Kaduk, James A.
Lin, YuJai
Swift, Jennifer A.
author_sort Thornton, Alyssa M.
collection PubMed
description [Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns with widely varying intensities. Using block Rietveld refinement methods of powder diffraction data, here we identify ammonium urate hydrate (AUH) as a likely component in natural uroliths. AUH has a planar 2-D hydrogen-bonded organic framework of urate ions separated by ammonium ions with water molecules residing in bisecting channels. AUH is stable up to 150 °C for short time periods but begins to decompose with prolonged heating times and/or at higher temperatures. Changes in the solid-state structure and composition of synthetic material over a temperature range from 25 to 300 °C are elucidated through thermogravimetric and spectroscopic data, combustion analysis, and time-resolved synchrotron powder X-ray diffraction studies. We contend that biogenic ammonium urate is more accurately modeled as a mixture of AUH and anhydrous ammonium urate, in ratios that can vary depending on the growth environment. The similar but not identical diffraction patterns of these two forms likely account for much of the variability seen in natural ammonium urate samples.
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spelling pubmed-104862792023-09-09 An Improved Model for Biogenic Ammonium Urate Thornton, Alyssa M. Fawcett, Timothy G. Kaduk, James A. Lin, YuJai Swift, Jennifer A. Cryst Growth Des [Image: see text] The pathological crystallization of ammonium urate inside the urinary tract is a well-documented medical condition; however, structural studies of the biogenic material have proven challenging owing to its propensity to precipitate as a powder and to exhibit diffraction patterns with widely varying intensities. Using block Rietveld refinement methods of powder diffraction data, here we identify ammonium urate hydrate (AUH) as a likely component in natural uroliths. AUH has a planar 2-D hydrogen-bonded organic framework of urate ions separated by ammonium ions with water molecules residing in bisecting channels. AUH is stable up to 150 °C for short time periods but begins to decompose with prolonged heating times and/or at higher temperatures. Changes in the solid-state structure and composition of synthetic material over a temperature range from 25 to 300 °C are elucidated through thermogravimetric and spectroscopic data, combustion analysis, and time-resolved synchrotron powder X-ray diffraction studies. We contend that biogenic ammonium urate is more accurately modeled as a mixture of AUH and anhydrous ammonium urate, in ratios that can vary depending on the growth environment. The similar but not identical diffraction patterns of these two forms likely account for much of the variability seen in natural ammonium urate samples. American Chemical Society 2023-08-16 /pmc/articles/PMC10486279/ /pubmed/37692332 http://dx.doi.org/10.1021/acs.cgd.3c00789 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Thornton, Alyssa M.
Fawcett, Timothy G.
Kaduk, James A.
Lin, YuJai
Swift, Jennifer A.
An Improved Model for Biogenic Ammonium Urate
title An Improved Model for Biogenic Ammonium Urate
title_full An Improved Model for Biogenic Ammonium Urate
title_fullStr An Improved Model for Biogenic Ammonium Urate
title_full_unstemmed An Improved Model for Biogenic Ammonium Urate
title_short An Improved Model for Biogenic Ammonium Urate
title_sort improved model for biogenic ammonium urate
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10486279/
https://www.ncbi.nlm.nih.gov/pubmed/37692332
http://dx.doi.org/10.1021/acs.cgd.3c00789
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