Cargando…

Extensive Angular Sampling Enables the Sensitive Localization of Macromolecules in Electron Tomograms

Cryo-electron tomography provides 3D images of macromolecules in their cellular context. To detect macromolecules in tomograms, template matching (TM) is often used, which uses 3D models that are often reliable for substantial parts of the macromolecules. However, the extent of rotational searches i...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chaillet, Marten L., van der Schot, Gijs, Gubins, Ilja, Roet, Sander, Veltkamp, Remco C., Förster, Friedrich
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10487639/ https://www.ncbi.nlm.nih.gov/pubmed/37686180 http://dx.doi.org/10.3390/ijms241713375

Ejemplares similares

Volumetric macromolecule identification in cryo-electron tomograms using capsule networks
por: Hajarolasvadi, Noushin, et al.
Publicado: (2022)

TomoTwin: generalized 3D localization of macromolecules in cryo-electron tomograms with structural data mining
por: Rice, Gavin, et al.
Publicado: (2023)

Deep learning-based subdivision approach for large scale macromolecules structure recovery from electron cryo tomograms
por: Xu, Min, et al.
Publicado: (2017)

Adversarial domain adaptation for cross data source macromolecule in situ structural classification in cellular electron cryo-tomograms
por: Lin, Ruogu, et al.
Publicado: (2019)

Subtomogram analysis: The sum of a tomogram’s particles reveals molecular structure in situ
por: Förster, Friedrich
Publicado: (2022)

Pneumatization of the zygomatic process of temporal bone on computed tomograms
por: Friedrich, Reinhard E., et al.
Publicado: (2016)

A convolutional neural network for fast upsampling of undersampled tomograms in X-ray CT time-series using a representative highly sampled tomogram
por: Bellos, Dimitrios, et al.
Publicado: (2019)

Entropy-regularized deconvolution of cellular cryotransmission electron tomograms
por: Croxford, Matthew, et al.
Publicado: (2021)

Template-free detection of macromolecular complexes in cryo electron tomograms
por: Xu, Min, et al.
Publicado: (2011)

Automated Stitching of Microtubule Centerlines across Serial Electron Tomograms
por: Weber, Britta, et al.
Publicado: (2014)

Efficient manual annotation of cryogenic electron tomograms using IMOD
por: Danita, Cristina, et al.
Publicado: (2022)

Object reconstruction from focused positron tomograms
por: Townsend, D, et al.
Publicado: (1978)

Graph identification of proteins in tomograms (GRIP‐Tomo)
por: George, August, et al.
Publicado: (2023)

Convolutional Neural Networks for Automated Annotation of Cellular Cryo-Electron Tomograms
por: Chen, Muyuan, et al.
Publicado: (2017)

Correlation between gray values of cone-beam computed tomograms and Hounsfield units of computed tomograms: A systematic review and meta-analysis
por: Selvaraj, Abirami, et al.
Publicado: (2022)

Few-shot learning for classification of novel macromolecular structures in cryo-electron tomograms
por: Li, Ran, et al.
Publicado: (2020)

Self-supervised learning for macromolecular structure classification based on cryo-electron tomograms
por: Gupta, Tarun, et al.
Publicado: (2022)

Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN
por: Powell, Barrett M., et al.
Publicado: (2023)

Nanostructure-Enabled and Macromolecule-Grafted Surfaces for Biomedical Applications
por: Small, Madeline, et al.
Publicado: (2018)

Contrast transfer function correction applied to cryo-electron tomography and sub-tomogram averaging
por: Zanetti, Giulia, et al.
Publicado: (2009)

Advances in Single-Particle Electron Cryomicroscopy Structure Determination applied to Sub-tomogram Averaging
por: Bharat, Tanmay A.M., et al.
Publicado: (2015)

Simulating cryo electron tomograms of crowded cell cytoplasm for assessment of automated particle picking
por: Pei, Long, et al.
Publicado: (2016)

emClarity: Software for High Resolution Cryo-electron Tomography and Sub-tomogram Averaging
por: Himes, Benjamin A., et al.
Publicado: (2018)

Automated classification of synaptic vesicles in electron tomograms of C. elegans using machine learning
por: Kaltdorf, Kristin Verena, et al.
Publicado: (2018)

Frequency and volumetry of infraorbital ethmoid cells (Haller cells) on cone-beam computed tomograms (CBCT) of the mid-face
por: Friedrich, Reinhard E., et al.
Publicado: (2017)

ArtiaX: An electron tomography toolbox for the interactive handling of sub‐tomograms in UCSF ChimeraX
por: Ermel, Utz H., et al.
Publicado: (2022)

Role of anterior segment optical coherence tomogram in Descemet's membrane detachment
por: Kothari, Sonia, et al.
Publicado: (2011)

A 3D Image Filter for Parameter-Free Segmentation of Macromolecular Structures from Electron Tomograms
por: Ali, Rubbiya A., et al.
Publicado: (2012)

Hydroxyl-rich macromolecules enable the bio-inspired synthesis of single crystal nanocomposites
por: Kim, Yi-Yeoun, et al.
Publicado: (2019)

Universal in vivo Textural Model for Human Skin based on Optical Coherence Tomograms
por: Adabi, Saba, et al.
Publicado: (2017)

The Effect of the Position Determination Error for Flexible Linear Array Elements on the Tomogram Focusing
por: Sednev, Dmitry A., et al.
Publicado: (2023)

Determination of Molecular Structures of HIV Envelope Glycoproteins using Cryo-Electron Tomography and Automated Sub-tomogram Averaging
por: Meyerson, Joel R., et al.
Publicado: (2011)

A unified framework for packing deformable and non-deformable subcellular structures in crowded cryo-electron tomogram simulation
por: Liu, Sinuo, et al.
Publicado: (2020)

Generating Chromosome Geometries in a Minimal Cell From Cryo-Electron Tomograms and Chromosome Conformation Capture Maps
por: Gilbert, Benjamin R., et al.
Publicado: (2021)

Polarized macromolecules
Publicado: (1986)

Macromolécules polarisées
Publicado: (1986)

Modeling macromolecules.
por: Manuel, J
Publicado: (1995)

Informational Macromolecules
por: Lukens, Lewis
Publicado: (1963)

Marine Biological Macromolecules and Chemically Modified Macromolecules; Potential Anticoagulants
por: Chandika, Pathum, et al.
Publicado: (2022)

Path Sampling Simulations Reveal How the Q61L Mutation Alters the Dynamics of KRas
por: Roet, Sander, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_cnml06q3sn0oc7qaf5e6tta04k