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Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes
Human CXCR2 has seven ligands, i.e., CXCL1, CXCL2, CXCL3, CXCL5, CXCL6, CXCL7, and CXCL8/IL-8—chemokines with nearly identical properties. However, no available study has compared the contribution of all CXCR2 ligands to cancer progression. That is why, in this study, we conducted a bioinformatic an...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10487711/ https://www.ncbi.nlm.nih.gov/pubmed/37686093 http://dx.doi.org/10.3390/ijms241713287 |
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author | Korbecki, Jan Bosiacki, Mateusz Chlubek, Dariusz Baranowska-Bosiacka, Irena |
author_facet | Korbecki, Jan Bosiacki, Mateusz Chlubek, Dariusz Baranowska-Bosiacka, Irena |
author_sort | Korbecki, Jan |
collection | PubMed |
description | Human CXCR2 has seven ligands, i.e., CXCL1, CXCL2, CXCL3, CXCL5, CXCL6, CXCL7, and CXCL8/IL-8—chemokines with nearly identical properties. However, no available study has compared the contribution of all CXCR2 ligands to cancer progression. That is why, in this study, we conducted a bioinformatic analysis using the GEPIA, UALCAN, and TIMER2.0 databases to investigate the role of CXCR2 ligands in 31 different types of cancer, including glioblastoma, melanoma, and colon, esophageal, gastric, kidney, liver, lung, ovarian, pancreatic, and prostate cancer. We focused on the differences in the regulation of expression (using the Tfsitescan and miRDB databases) and analyzed mutation types in CXCR2 ligand genes in cancers (using the cBioPortal). The data showed that the effect of CXCR2 ligands on prognosis depends on the type of cancer. CXCR2 ligands were associated with EMT, angiogenesis, recruiting neutrophils to the tumor microenvironment, and the count of M1 macrophages. The regulation of the expression of each CXCR2 ligand was different and, thus, each analyzed chemokine may have a different function in cancer processes. Our findings suggest that each type of cancer has a unique pattern of CXCR2 ligand involvement in cancer progression, with each ligand having a unique regulation of expression. |
format | Online Article Text |
id | pubmed-10487711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104877112023-09-09 Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes Korbecki, Jan Bosiacki, Mateusz Chlubek, Dariusz Baranowska-Bosiacka, Irena Int J Mol Sci Article Human CXCR2 has seven ligands, i.e., CXCL1, CXCL2, CXCL3, CXCL5, CXCL6, CXCL7, and CXCL8/IL-8—chemokines with nearly identical properties. However, no available study has compared the contribution of all CXCR2 ligands to cancer progression. That is why, in this study, we conducted a bioinformatic analysis using the GEPIA, UALCAN, and TIMER2.0 databases to investigate the role of CXCR2 ligands in 31 different types of cancer, including glioblastoma, melanoma, and colon, esophageal, gastric, kidney, liver, lung, ovarian, pancreatic, and prostate cancer. We focused on the differences in the regulation of expression (using the Tfsitescan and miRDB databases) and analyzed mutation types in CXCR2 ligand genes in cancers (using the cBioPortal). The data showed that the effect of CXCR2 ligands on prognosis depends on the type of cancer. CXCR2 ligands were associated with EMT, angiogenesis, recruiting neutrophils to the tumor microenvironment, and the count of M1 macrophages. The regulation of the expression of each CXCR2 ligand was different and, thus, each analyzed chemokine may have a different function in cancer processes. Our findings suggest that each type of cancer has a unique pattern of CXCR2 ligand involvement in cancer progression, with each ligand having a unique regulation of expression. MDPI 2023-08-27 /pmc/articles/PMC10487711/ /pubmed/37686093 http://dx.doi.org/10.3390/ijms241713287 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Korbecki, Jan Bosiacki, Mateusz Chlubek, Dariusz Baranowska-Bosiacka, Irena Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title | Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title_full | Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title_fullStr | Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title_full_unstemmed | Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title_short | Bioinformatic Analysis of the CXCR2 Ligands in Cancer Processes |
title_sort | bioinformatic analysis of the cxcr2 ligands in cancer processes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10487711/ https://www.ncbi.nlm.nih.gov/pubmed/37686093 http://dx.doi.org/10.3390/ijms241713287 |
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