Cargando…

Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.

The wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the WAK gene family. Firstly, 178 WAK genes were identified. A phylogenetic tree was constructed of the Cruciferous WAK...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Zishu, Duan, Yi, Liu, Hui, Xu, Mingchao, Zhang, Zhi, Xu, Ling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10487794/
https://www.ncbi.nlm.nih.gov/pubmed/37686407
http://dx.doi.org/10.3390/ijms241713601
_version_ 1785103325502373888
author Xu, Zishu
Duan, Yi
Liu, Hui
Xu, Mingchao
Zhang, Zhi
Xu, Ling
author_facet Xu, Zishu
Duan, Yi
Liu, Hui
Xu, Mingchao
Zhang, Zhi
Xu, Ling
author_sort Xu, Zishu
collection PubMed
description The wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the WAK gene family. Firstly, 178 WAK genes were identified. A phylogenetic tree was constructed of the Cruciferous WAK proteins into four categories, of which the Brassica rapa, Brassica oleracea and Brassica napus genes in the U’s triangle were more closely related. The WAK gene family was unevenly distributed in B. napus chromosomal imaging, with the largest number of BnWAK genes located on chromosome C08. In the expression analysis, the expression patterns of the WAK gene family varied under different stress treatments, and some members of BnWAKs were significantly different under stress treatments. This study lays a foundation for further revealing the functional mechanisms of the WAK gene family in Brassica napus.
format Online
Article
Text
id pubmed-10487794
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-104877942023-09-09 Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L. Xu, Zishu Duan, Yi Liu, Hui Xu, Mingchao Zhang, Zhi Xu, Ling Int J Mol Sci Article The wall-associated kinase family contributes to plant cell elongation and pathogen recognition. Nine Cruciferous species were studied for identification and molecular evolution of the WAK gene family. Firstly, 178 WAK genes were identified. A phylogenetic tree was constructed of the Cruciferous WAK proteins into four categories, of which the Brassica rapa, Brassica oleracea and Brassica napus genes in the U’s triangle were more closely related. The WAK gene family was unevenly distributed in B. napus chromosomal imaging, with the largest number of BnWAK genes located on chromosome C08. In the expression analysis, the expression patterns of the WAK gene family varied under different stress treatments, and some members of BnWAKs were significantly different under stress treatments. This study lays a foundation for further revealing the functional mechanisms of the WAK gene family in Brassica napus. MDPI 2023-09-02 /pmc/articles/PMC10487794/ /pubmed/37686407 http://dx.doi.org/10.3390/ijms241713601 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xu, Zishu
Duan, Yi
Liu, Hui
Xu, Mingchao
Zhang, Zhi
Xu, Ling
Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title_full Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title_fullStr Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title_full_unstemmed Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title_short Analysis of WAK Genes in Nine Cruciferous Species with a Focus on Brassica napus L.
title_sort analysis of wak genes in nine cruciferous species with a focus on brassica napus l.
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10487794/
https://www.ncbi.nlm.nih.gov/pubmed/37686407
http://dx.doi.org/10.3390/ijms241713601
work_keys_str_mv AT xuzishu analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl
AT duanyi analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl
AT liuhui analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl
AT xumingchao analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl
AT zhangzhi analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl
AT xuling analysisofwakgenesinninecruciferousspecieswithafocusonbrassicanapusl