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The New Functional Hybrid Chaperone Protein ADGroEL–SacSm

The creation of new proteins by combining natural domains is a commonly used technique in protein engineering. In this work, we have tested the possibilities and limitations of using circular homo-oligomeric Sm-like proteins as a basis for attaching other domains. Attachment to such a stable base sh...

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Autores principales: Mikhaylina, Alisa, Lekontseva, Natalia, Marchenkov, Victor, Kolesnikova, Viktoria, Khairetdinova, Albina, Nikonov, Oleg, Balobanov, Vitalii
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10488932/
https://www.ncbi.nlm.nih.gov/pubmed/37687025
http://dx.doi.org/10.3390/molecules28176196
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author Mikhaylina, Alisa
Lekontseva, Natalia
Marchenkov, Victor
Kolesnikova, Viktoria
Khairetdinova, Albina
Nikonov, Oleg
Balobanov, Vitalii
author_facet Mikhaylina, Alisa
Lekontseva, Natalia
Marchenkov, Victor
Kolesnikova, Viktoria
Khairetdinova, Albina
Nikonov, Oleg
Balobanov, Vitalii
author_sort Mikhaylina, Alisa
collection PubMed
description The creation of new proteins by combining natural domains is a commonly used technique in protein engineering. In this work, we have tested the possibilities and limitations of using circular homo-oligomeric Sm-like proteins as a basis for attaching other domains. Attachment to such a stable base should bring target domains together and keep them in the correct mutual orientation. We chose a circular homoheptameric Sm-like protein from Sulfolobus acidocaldarius as a stable backbone and the apical domain of the GroEL chaperone protein as the domain of study. This domain by itself, separated from the rest of the GroEL molecule, does not form an oligomeric ring. In our design, the hyperstable SacSm held the seven ADGroELs together and forced them to oligomerize. The designed hybrid protein was obtained and studied with various physical and chemical methods. Stepwise assembly and self-organization of this protein have been shown. First, the SacSm base was assembled, and then ADGroEL was folded on it. Functional testing showed that the obtained fusion protein was able to bind the same non-native proteins as the full-length GroEL chaperone. It also reduced the aggregation of a number of proteins when they were heated, which confirms its chaperone activity. Thus, the engineering path we chose made it possible to create an efficient thermostable chaperone. The result obtained shows the productivity of the way we chose for the creation and stabilization of oligomeric proteins.
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spelling pubmed-104889322023-09-09 The New Functional Hybrid Chaperone Protein ADGroEL–SacSm Mikhaylina, Alisa Lekontseva, Natalia Marchenkov, Victor Kolesnikova, Viktoria Khairetdinova, Albina Nikonov, Oleg Balobanov, Vitalii Molecules Article The creation of new proteins by combining natural domains is a commonly used technique in protein engineering. In this work, we have tested the possibilities and limitations of using circular homo-oligomeric Sm-like proteins as a basis for attaching other domains. Attachment to such a stable base should bring target domains together and keep them in the correct mutual orientation. We chose a circular homoheptameric Sm-like protein from Sulfolobus acidocaldarius as a stable backbone and the apical domain of the GroEL chaperone protein as the domain of study. This domain by itself, separated from the rest of the GroEL molecule, does not form an oligomeric ring. In our design, the hyperstable SacSm held the seven ADGroELs together and forced them to oligomerize. The designed hybrid protein was obtained and studied with various physical and chemical methods. Stepwise assembly and self-organization of this protein have been shown. First, the SacSm base was assembled, and then ADGroEL was folded on it. Functional testing showed that the obtained fusion protein was able to bind the same non-native proteins as the full-length GroEL chaperone. It also reduced the aggregation of a number of proteins when they were heated, which confirms its chaperone activity. Thus, the engineering path we chose made it possible to create an efficient thermostable chaperone. The result obtained shows the productivity of the way we chose for the creation and stabilization of oligomeric proteins. MDPI 2023-08-23 /pmc/articles/PMC10488932/ /pubmed/37687025 http://dx.doi.org/10.3390/molecules28176196 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mikhaylina, Alisa
Lekontseva, Natalia
Marchenkov, Victor
Kolesnikova, Viktoria
Khairetdinova, Albina
Nikonov, Oleg
Balobanov, Vitalii
The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title_full The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title_fullStr The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title_full_unstemmed The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title_short The New Functional Hybrid Chaperone Protein ADGroEL–SacSm
title_sort new functional hybrid chaperone protein adgroel–sacsm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10488932/
https://www.ncbi.nlm.nih.gov/pubmed/37687025
http://dx.doi.org/10.3390/molecules28176196
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