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The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer
Recently, there has been growing interest among researchers in exploring the effects of epithelial-mesenchymal transformation (EMT) or N6-Methyladenosine (m6A) modification regulators on tumor development. However, the synergistic efficiency of these regulators in relation to ovarian cancer developm...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10491820/ https://www.ncbi.nlm.nih.gov/pubmed/37684273 http://dx.doi.org/10.1038/s41598-023-41554-y |
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author | Zhang, Yanna Wang, Xun Duan, Xiaogang Du, Ting Chen, Xiancheng |
author_facet | Zhang, Yanna Wang, Xun Duan, Xiaogang Du, Ting Chen, Xiancheng |
author_sort | Zhang, Yanna |
collection | PubMed |
description | Recently, there has been growing interest among researchers in exploring the effects of epithelial-mesenchymal transformation (EMT) or N6-Methyladenosine (m6A) modification regulators on tumor development. However, the synergistic efficiency of these regulators in relation to ovarian cancer development remains unclear. This study aims to explore the transcription patterns of main regulators, including 19 EMT and 22 m6A, in ovarian cancer samples from TCGA datasets and normal samples from GTEx datasets. After conducting a LASSO regression analysis, ten prognostic signatures were identified, namely KIAA1429, WTAP, SNAI1, AXL, IGF2BP1, ELAVL1, CBLL1, CDH2, NANOG and ALKBH5. These signatures were found to have a comprehensive effect on immune infiltrating signatures and the final prognostic outcome. Next, utilizing the ssGSEA algorithm and conducting overall survival analyses, we have identified the key prognosis-related immunological signatures in ovarian cancer to be ALKBH5, WTAP, ELAVL1, and CDH2 as the regulators. The characteristic immune response and related genetic expression have revealed a significant correlation between the alteration of m6A regulators and EMT regulators, indicating a synergistic effect between these two factors in the development of ovarian cancer. In summary, our research offers a novel perspective and strategy to enhance the occurrence, progression, and prognosis of ovarian cancer. |
format | Online Article Text |
id | pubmed-10491820 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104918202023-09-10 The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer Zhang, Yanna Wang, Xun Duan, Xiaogang Du, Ting Chen, Xiancheng Sci Rep Article Recently, there has been growing interest among researchers in exploring the effects of epithelial-mesenchymal transformation (EMT) or N6-Methyladenosine (m6A) modification regulators on tumor development. However, the synergistic efficiency of these regulators in relation to ovarian cancer development remains unclear. This study aims to explore the transcription patterns of main regulators, including 19 EMT and 22 m6A, in ovarian cancer samples from TCGA datasets and normal samples from GTEx datasets. After conducting a LASSO regression analysis, ten prognostic signatures were identified, namely KIAA1429, WTAP, SNAI1, AXL, IGF2BP1, ELAVL1, CBLL1, CDH2, NANOG and ALKBH5. These signatures were found to have a comprehensive effect on immune infiltrating signatures and the final prognostic outcome. Next, utilizing the ssGSEA algorithm and conducting overall survival analyses, we have identified the key prognosis-related immunological signatures in ovarian cancer to be ALKBH5, WTAP, ELAVL1, and CDH2 as the regulators. The characteristic immune response and related genetic expression have revealed a significant correlation between the alteration of m6A regulators and EMT regulators, indicating a synergistic effect between these two factors in the development of ovarian cancer. In summary, our research offers a novel perspective and strategy to enhance the occurrence, progression, and prognosis of ovarian cancer. Nature Publishing Group UK 2023-09-08 /pmc/articles/PMC10491820/ /pubmed/37684273 http://dx.doi.org/10.1038/s41598-023-41554-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhang, Yanna Wang, Xun Duan, Xiaogang Du, Ting Chen, Xiancheng The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title | The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title_full | The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title_fullStr | The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title_full_unstemmed | The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title_short | The synergistic effect of EMT regulators and m6A modification on prognosis-related immunological signatures for ovarian cancer |
title_sort | synergistic effect of emt regulators and m6a modification on prognosis-related immunological signatures for ovarian cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10491820/ https://www.ncbi.nlm.nih.gov/pubmed/37684273 http://dx.doi.org/10.1038/s41598-023-41554-y |
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