Cargando…
Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride
Iron-sulfur clusters are prosthetic groups of proteins involved in various biological processes. However, details of the immature state of the iron-sulfur cluster into proteins have not yet been elucidated. We report here the first structural analysis of the Zn-containing form of a Rieske-type iron-...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492824/ https://www.ncbi.nlm.nih.gov/pubmed/37689761 http://dx.doi.org/10.1038/s42004-023-01000-6 |
_version_ | 1785104340557496320 |
---|---|
author | Tsutsumi, Erika Niwa, Satomi Takeda, Ryota Sakamoto, Natsuki Okatsu, Kei Fukai, Shuya Ago, Hideo Nagao, Satoshi Sekiguchi, Hiroshi Takeda, Kazuki |
author_facet | Tsutsumi, Erika Niwa, Satomi Takeda, Ryota Sakamoto, Natsuki Okatsu, Kei Fukai, Shuya Ago, Hideo Nagao, Satoshi Sekiguchi, Hiroshi Takeda, Kazuki |
author_sort | Tsutsumi, Erika |
collection | PubMed |
description | Iron-sulfur clusters are prosthetic groups of proteins involved in various biological processes. However, details of the immature state of the iron-sulfur cluster into proteins have not yet been elucidated. We report here the first structural analysis of the Zn-containing form of a Rieske-type iron-sulfur protein, PetA, from Thermochromatium tepidum (TtPetA) by X-ray crystallography and small-angle X-ray scattering analysis. The Zn-containing form of TtPetA was indicated to be a dimer in solution. The zinc ion adopts a regular tetra-coordination with two chloride ions and two cysteine residues. Only a histidine residue in the cluster-binding site exhibited a conformational difference from the [2Fe-2S] containing form. The Zn-containing structure indicates that the conformation of the cluster binding site is already constructed and stabilized before insertion of [2Fe-2S]. The binding mode of ZnCl(2), similar to the [2Fe-2S] cluster, suggests that the zinc ions might be involved in the insertion of the [2Fe-2S] cluster. |
format | Online Article Text |
id | pubmed-10492824 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104928242023-09-11 Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride Tsutsumi, Erika Niwa, Satomi Takeda, Ryota Sakamoto, Natsuki Okatsu, Kei Fukai, Shuya Ago, Hideo Nagao, Satoshi Sekiguchi, Hiroshi Takeda, Kazuki Commun Chem Article Iron-sulfur clusters are prosthetic groups of proteins involved in various biological processes. However, details of the immature state of the iron-sulfur cluster into proteins have not yet been elucidated. We report here the first structural analysis of the Zn-containing form of a Rieske-type iron-sulfur protein, PetA, from Thermochromatium tepidum (TtPetA) by X-ray crystallography and small-angle X-ray scattering analysis. The Zn-containing form of TtPetA was indicated to be a dimer in solution. The zinc ion adopts a regular tetra-coordination with two chloride ions and two cysteine residues. Only a histidine residue in the cluster-binding site exhibited a conformational difference from the [2Fe-2S] containing form. The Zn-containing structure indicates that the conformation of the cluster binding site is already constructed and stabilized before insertion of [2Fe-2S]. The binding mode of ZnCl(2), similar to the [2Fe-2S] cluster, suggests that the zinc ions might be involved in the insertion of the [2Fe-2S] cluster. Nature Publishing Group UK 2023-09-09 /pmc/articles/PMC10492824/ /pubmed/37689761 http://dx.doi.org/10.1038/s42004-023-01000-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Tsutsumi, Erika Niwa, Satomi Takeda, Ryota Sakamoto, Natsuki Okatsu, Kei Fukai, Shuya Ago, Hideo Nagao, Satoshi Sekiguchi, Hiroshi Takeda, Kazuki Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title | Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title_full | Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title_fullStr | Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title_full_unstemmed | Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title_short | Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride |
title_sort | structure of a putative immature form of a rieske-type iron-sulfur protein in complex with zinc chloride |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492824/ https://www.ncbi.nlm.nih.gov/pubmed/37689761 http://dx.doi.org/10.1038/s42004-023-01000-6 |
work_keys_str_mv | AT tsutsumierika structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT niwasatomi structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT takedaryota structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT sakamotonatsuki structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT okatsukei structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT fukaishuya structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT agohideo structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT nagaosatoshi structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT sekiguchihiroshi structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride AT takedakazuki structureofaputativeimmatureformofariesketypeironsulfurproteinincomplexwithzincchloride |