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Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications

Biological tissues are highly organized structures where spatial-temporal gradients (e.g., nutrients, hypoxia, cytokines) modulate multiple physiological and pathological processes including inflammation, tissue regeneration, embryogenesis, and cancer progression. Current in vitro technologies strug...

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Autores principales: Sanchez-de-Diego, Cristina, Virumbrales-Muñoz, María, Hermes, Brock, Juang, Terry D., Juang, Duane S., Riendeau, Jeremiah, Guzman, Emmanuel Contreras, Reed-McBain, Catherine A., Abizanda-Campo, Sara, Patel, Janmesh, Hess, Nicholas J., Skala, Melissa C., Beebe, David J., Ayuso, Jose M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492845/
https://www.ncbi.nlm.nih.gov/pubmed/37689746
http://dx.doi.org/10.1038/s42003-023-05282-3
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author Sanchez-de-Diego, Cristina
Virumbrales-Muñoz, María
Hermes, Brock
Juang, Terry D.
Juang, Duane S.
Riendeau, Jeremiah
Guzman, Emmanuel Contreras
Reed-McBain, Catherine A.
Abizanda-Campo, Sara
Patel, Janmesh
Hess, Nicholas J.
Skala, Melissa C.
Beebe, David J.
Ayuso, Jose M.
author_facet Sanchez-de-Diego, Cristina
Virumbrales-Muñoz, María
Hermes, Brock
Juang, Terry D.
Juang, Duane S.
Riendeau, Jeremiah
Guzman, Emmanuel Contreras
Reed-McBain, Catherine A.
Abizanda-Campo, Sara
Patel, Janmesh
Hess, Nicholas J.
Skala, Melissa C.
Beebe, David J.
Ayuso, Jose M.
author_sort Sanchez-de-Diego, Cristina
collection PubMed
description Biological tissues are highly organized structures where spatial-temporal gradients (e.g., nutrients, hypoxia, cytokines) modulate multiple physiological and pathological processes including inflammation, tissue regeneration, embryogenesis, and cancer progression. Current in vitro technologies struggle to capture the complexity of these transient microenvironmental gradients, do not provide dynamic control over the gradient profile, are complex and poorly suited for high throughput applications. Therefore, we have designed Griddent, a user-friendly platform with the capability of generating controllable and reversible gradients in a 3D microenvironment. Our platform consists of an array of 32 microfluidic chambers connected to a 384 well-array through a diffusion port at the bottom of each reservoir well. The diffusion ports are optimized to ensure gradient stability and facilitate manual micropipette loading. This platform is compatible with molecular and functional spatial biology as well as optical and fluorescence microscopy. In this work, we have used this platform to study cancer progression.
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spelling pubmed-104928452023-09-11 Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications Sanchez-de-Diego, Cristina Virumbrales-Muñoz, María Hermes, Brock Juang, Terry D. Juang, Duane S. Riendeau, Jeremiah Guzman, Emmanuel Contreras Reed-McBain, Catherine A. Abizanda-Campo, Sara Patel, Janmesh Hess, Nicholas J. Skala, Melissa C. Beebe, David J. Ayuso, Jose M. Commun Biol Article Biological tissues are highly organized structures where spatial-temporal gradients (e.g., nutrients, hypoxia, cytokines) modulate multiple physiological and pathological processes including inflammation, tissue regeneration, embryogenesis, and cancer progression. Current in vitro technologies struggle to capture the complexity of these transient microenvironmental gradients, do not provide dynamic control over the gradient profile, are complex and poorly suited for high throughput applications. Therefore, we have designed Griddent, a user-friendly platform with the capability of generating controllable and reversible gradients in a 3D microenvironment. Our platform consists of an array of 32 microfluidic chambers connected to a 384 well-array through a diffusion port at the bottom of each reservoir well. The diffusion ports are optimized to ensure gradient stability and facilitate manual micropipette loading. This platform is compatible with molecular and functional spatial biology as well as optical and fluorescence microscopy. In this work, we have used this platform to study cancer progression. Nature Publishing Group UK 2023-09-09 /pmc/articles/PMC10492845/ /pubmed/37689746 http://dx.doi.org/10.1038/s42003-023-05282-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sanchez-de-Diego, Cristina
Virumbrales-Muñoz, María
Hermes, Brock
Juang, Terry D.
Juang, Duane S.
Riendeau, Jeremiah
Guzman, Emmanuel Contreras
Reed-McBain, Catherine A.
Abizanda-Campo, Sara
Patel, Janmesh
Hess, Nicholas J.
Skala, Melissa C.
Beebe, David J.
Ayuso, Jose M.
Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title_full Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title_fullStr Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title_full_unstemmed Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title_short Griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
title_sort griddient: a microfluidic array to generate reconfigurable gradients on-demand for spatial biology applications
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492845/
https://www.ncbi.nlm.nih.gov/pubmed/37689746
http://dx.doi.org/10.1038/s42003-023-05282-3
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