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Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans
Candida albicans is opportunistic pathogenic yeast that is widely distributed throughout the world and is classified as the most critical fungal pathogen group. Candida albicans is a common microbiota of healthy individuals but can cause superficial and invasive infections in immune compromised indi...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Biomedical Informatics
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492916/ https://www.ncbi.nlm.nih.gov/pubmed/37701516 http://dx.doi.org/10.6026/973206300181146 |
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author | Dey, Joydeb Kishore Prasad, Himanshu |
author_facet | Dey, Joydeb Kishore Prasad, Himanshu |
author_sort | Dey, Joydeb |
collection | PubMed |
description | Candida albicans is opportunistic pathogenic yeast that is widely distributed throughout the world and is classified as the most critical fungal pathogen group. Candida albicans is a common microbiota of healthy individuals but can cause superficial and invasive infections in immune compromised individuals. Protein Post-translational modifications involving methylation of lysine amino acids stand for a major regulator of eukaryotic transcription, and pathways controlling several cellular processes. SMYD makes up a SET (Su (Var) 3-9, Enhancer-of-zeste and Trithorax) and MYND (Myeloid, Nervy, and DEAF-1) domain containing lysine methyl transferase subfamily that transfers methyl groups from methyl donors onto lysine residues in histones (H3 and H4) and non-histone proteins. The SET domain is the methyltransferase catalytic domain, while MYND participates in both protein and DNA interactions. Well-studied examples of SMYD proteins are five human and two Saccharomyces cerevisiae, constituting examples of histone and non-histone protein lysine methyl transferase members. However, there is limited understanding of SET lysine methyltransferases, including the SMYD subfamily, in the pathogenic fungi Candida albicans. Using bioinformatics tools, we characterized the SMYD domain containing proteins in the important pathogen. We report the presence of an atypical SMYD member (CaO19.3863) as a new lysine methyltransferase that can be a target for antifungal therapy. |
format | Online Article Text |
id | pubmed-10492916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-104929162023-09-11 Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans Dey, Joydeb Kishore Prasad, Himanshu Bioinformation Research Article Candida albicans is opportunistic pathogenic yeast that is widely distributed throughout the world and is classified as the most critical fungal pathogen group. Candida albicans is a common microbiota of healthy individuals but can cause superficial and invasive infections in immune compromised individuals. Protein Post-translational modifications involving methylation of lysine amino acids stand for a major regulator of eukaryotic transcription, and pathways controlling several cellular processes. SMYD makes up a SET (Su (Var) 3-9, Enhancer-of-zeste and Trithorax) and MYND (Myeloid, Nervy, and DEAF-1) domain containing lysine methyl transferase subfamily that transfers methyl groups from methyl donors onto lysine residues in histones (H3 and H4) and non-histone proteins. The SET domain is the methyltransferase catalytic domain, while MYND participates in both protein and DNA interactions. Well-studied examples of SMYD proteins are five human and two Saccharomyces cerevisiae, constituting examples of histone and non-histone protein lysine methyl transferase members. However, there is limited understanding of SET lysine methyltransferases, including the SMYD subfamily, in the pathogenic fungi Candida albicans. Using bioinformatics tools, we characterized the SMYD domain containing proteins in the important pathogen. We report the presence of an atypical SMYD member (CaO19.3863) as a new lysine methyltransferase that can be a target for antifungal therapy. Biomedical Informatics 2022-12-31 /pmc/articles/PMC10492916/ /pubmed/37701516 http://dx.doi.org/10.6026/973206300181146 Text en © 2022 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | Research Article Dey, Joydeb Kishore Prasad, Himanshu Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title | Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title_full | Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title_fullStr | Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title_full_unstemmed | Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title_short | Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans |
title_sort | structure based functional annotation of a mynd-less lysine methyl transferase incandida albicans |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10492916/ https://www.ncbi.nlm.nih.gov/pubmed/37701516 http://dx.doi.org/10.6026/973206300181146 |
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