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Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species

The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first trans...

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Detalles Bibliográficos
Autores principales: Fareed, Fathmath Shaman, Yen Yen, Sam, Singaram, Nallammai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493248/
https://www.ncbi.nlm.nih.gov/pubmed/37701715
http://dx.doi.org/10.1016/j.dib.2023.109507
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author Fareed, Fathmath Shaman
Yen Yen, Sam
Singaram, Nallammai
author_facet Fareed, Fathmath Shaman
Yen Yen, Sam
Singaram, Nallammai
author_sort Fareed, Fathmath Shaman
collection PubMed
description The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first transcriptomic analysis of seven Amomum species from Peninsular Malaysia, utilizing leaves, stems, and roots as sample material. Paired-end Illumina HiSeq technology was used for data generation which includes raw data, cleaned reads, de novo assembly, and functional annotation. The data is accessible via NCBI BioProject (PRJNA936673).
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spelling pubmed-104932482023-09-12 Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species Fareed, Fathmath Shaman Yen Yen, Sam Singaram, Nallammai Data Brief Data Article The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first transcriptomic analysis of seven Amomum species from Peninsular Malaysia, utilizing leaves, stems, and roots as sample material. Paired-end Illumina HiSeq technology was used for data generation which includes raw data, cleaned reads, de novo assembly, and functional annotation. The data is accessible via NCBI BioProject (PRJNA936673). Elsevier 2023-08-21 /pmc/articles/PMC10493248/ /pubmed/37701715 http://dx.doi.org/10.1016/j.dib.2023.109507 Text en © 2023 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Fareed, Fathmath Shaman
Yen Yen, Sam
Singaram, Nallammai
Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title_full Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title_fullStr Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title_full_unstemmed Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title_short Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
title_sort data of de novo assembly and functional annotation of transcriptome of peninsular malaysian amomum roxb. species
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493248/
https://www.ncbi.nlm.nih.gov/pubmed/37701715
http://dx.doi.org/10.1016/j.dib.2023.109507
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