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Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species
The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first trans...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493248/ https://www.ncbi.nlm.nih.gov/pubmed/37701715 http://dx.doi.org/10.1016/j.dib.2023.109507 |
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author | Fareed, Fathmath Shaman Yen Yen, Sam Singaram, Nallammai |
author_facet | Fareed, Fathmath Shaman Yen Yen, Sam Singaram, Nallammai |
author_sort | Fareed, Fathmath Shaman |
collection | PubMed |
description | The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first transcriptomic analysis of seven Amomum species from Peninsular Malaysia, utilizing leaves, stems, and roots as sample material. Paired-end Illumina HiSeq technology was used for data generation which includes raw data, cleaned reads, de novo assembly, and functional annotation. The data is accessible via NCBI BioProject (PRJNA936673). |
format | Online Article Text |
id | pubmed-10493248 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-104932482023-09-12 Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species Fareed, Fathmath Shaman Yen Yen, Sam Singaram, Nallammai Data Brief Data Article The Amomum genus comprises of perennial, tropical, herbaceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first transcriptomic analysis of seven Amomum species from Peninsular Malaysia, utilizing leaves, stems, and roots as sample material. Paired-end Illumina HiSeq technology was used for data generation which includes raw data, cleaned reads, de novo assembly, and functional annotation. The data is accessible via NCBI BioProject (PRJNA936673). Elsevier 2023-08-21 /pmc/articles/PMC10493248/ /pubmed/37701715 http://dx.doi.org/10.1016/j.dib.2023.109507 Text en © 2023 The Authors. Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Fareed, Fathmath Shaman Yen Yen, Sam Singaram, Nallammai Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title | Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title_full | Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title_fullStr | Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title_full_unstemmed | Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title_short | Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species |
title_sort | data of de novo assembly and functional annotation of transcriptome of peninsular malaysian amomum roxb. species |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493248/ https://www.ncbi.nlm.nih.gov/pubmed/37701715 http://dx.doi.org/10.1016/j.dib.2023.109507 |
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