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Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer
BACKGROUND: Ferroptosis is a distinct form of cell death that has the potential to supersede the drug resistance that is commonly observed with current chemotherapeutic agents. As a result, ferroptosis presents a new and innovative therapeutic pathway for cancer treatment. The current understanding...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493782/ https://www.ncbi.nlm.nih.gov/pubmed/37701097 http://dx.doi.org/10.21037/tcr-23-194 |
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author | Li, Weisheng Xiong, Yang Zhu, Junlei Jin, Xiaoxiao Meng, Jin He, Wenqiang |
author_facet | Li, Weisheng Xiong, Yang Zhu, Junlei Jin, Xiaoxiao Meng, Jin He, Wenqiang |
author_sort | Li, Weisheng |
collection | PubMed |
description | BACKGROUND: Ferroptosis is a distinct form of cell death that has the potential to supersede the drug resistance that is commonly observed with current chemotherapeutic agents. As a result, ferroptosis presents a new and innovative therapeutic pathway for cancer treatment. The current understanding regarding the expression of genes associated with ferroptosis in bladder cancer (BLCA) and their prognostic implications remains unclear. Consequently, this study aimed to examine the potential prognostic value of ferroptosis-associated long non-coding RNAs (lncRNAs) in BLCA. METHODS: The Cancer Genome Atlas (TCGA) was accessed to download RNA sequencing data and clinicopathological features of BLCA while accessing the FerrDb database to download ferroptosis-associated genes. The study calculated risk scores for ferroptosis-associated lncRNAs, and subsequently divided patients with BLCA into two groups, namely high- and low-risk, on the basis of the median risk score. Moreover, Kaplan-Meier (K-M) curves, Cox regression analysis, and column plots were utilized for evaluating the risk score prognostic value. Subsequently, the involvement of ferroptosis-associated mRNA, N6-methyladenosine (m6A) mRNA status, and immune responses was investigated for BLCA prognosis. RESULTS: Thirty-six lncRNAs were identified to be differently expressed and linked to the prognosis of BLCA. The findings from the K-M curve analysis indicated a significant association between a high-risk lncRNA profile and poor BLCA prognosis. The area under curve (AUC) value of the receiver operating characteristic (ROC) curve was 0.810. The risk assessment model exhibited superior performance in predicting prognosis for BLCA compared to conventional clinicopathological features. CONCLUSIONS: Thirty-six lncRNAs were found to be linked to ferroptosis for the prognosis of patients with BLCA, and these results may provide new insights for treating BLCA. |
format | Online Article Text |
id | pubmed-10493782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-104937822023-09-12 Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer Li, Weisheng Xiong, Yang Zhu, Junlei Jin, Xiaoxiao Meng, Jin He, Wenqiang Transl Cancer Res Original Article BACKGROUND: Ferroptosis is a distinct form of cell death that has the potential to supersede the drug resistance that is commonly observed with current chemotherapeutic agents. As a result, ferroptosis presents a new and innovative therapeutic pathway for cancer treatment. The current understanding regarding the expression of genes associated with ferroptosis in bladder cancer (BLCA) and their prognostic implications remains unclear. Consequently, this study aimed to examine the potential prognostic value of ferroptosis-associated long non-coding RNAs (lncRNAs) in BLCA. METHODS: The Cancer Genome Atlas (TCGA) was accessed to download RNA sequencing data and clinicopathological features of BLCA while accessing the FerrDb database to download ferroptosis-associated genes. The study calculated risk scores for ferroptosis-associated lncRNAs, and subsequently divided patients with BLCA into two groups, namely high- and low-risk, on the basis of the median risk score. Moreover, Kaplan-Meier (K-M) curves, Cox regression analysis, and column plots were utilized for evaluating the risk score prognostic value. Subsequently, the involvement of ferroptosis-associated mRNA, N6-methyladenosine (m6A) mRNA status, and immune responses was investigated for BLCA prognosis. RESULTS: Thirty-six lncRNAs were identified to be differently expressed and linked to the prognosis of BLCA. The findings from the K-M curve analysis indicated a significant association between a high-risk lncRNA profile and poor BLCA prognosis. The area under curve (AUC) value of the receiver operating characteristic (ROC) curve was 0.810. The risk assessment model exhibited superior performance in predicting prognosis for BLCA compared to conventional clinicopathological features. CONCLUSIONS: Thirty-six lncRNAs were found to be linked to ferroptosis for the prognosis of patients with BLCA, and these results may provide new insights for treating BLCA. AME Publishing Company 2023-08-28 2023-08-31 /pmc/articles/PMC10493782/ /pubmed/37701097 http://dx.doi.org/10.21037/tcr-23-194 Text en 2023 Translational Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Li, Weisheng Xiong, Yang Zhu, Junlei Jin, Xiaoxiao Meng, Jin He, Wenqiang Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title | Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title_full | Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title_fullStr | Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title_full_unstemmed | Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title_short | Establishing a prognostic model with ferroptosis-related long non-coding RNAs in bladder cancer |
title_sort | establishing a prognostic model with ferroptosis-related long non-coding rnas in bladder cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10493782/ https://www.ncbi.nlm.nih.gov/pubmed/37701097 http://dx.doi.org/10.21037/tcr-23-194 |
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