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The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis

The Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNA...

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Autores principales: Tu, Feiyun, Hou, Xiaodan, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10494728/
https://www.ncbi.nlm.nih.gov/pubmed/37701526
http://dx.doi.org/10.1080/23802359.2023.2256054
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author Tu, Feiyun
Hou, Xiaodan
Wang, Yi
author_facet Tu, Feiyun
Hou, Xiaodan
Wang, Yi
author_sort Tu, Feiyun
collection PubMed
description The Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a control region. The base composition of the C. wuchihensis total mitogenome as follows: A, 32.8%; G, 13.0%; T, 32.1%; and C, 22.1%, with an A + T content of 64.9%. Notably, a tandem repeat sequence (5′-CAC ACG TGT ACA-3′) was identified in the control region with 24 copy numbers. Additionally, phylogenetic analysis indicated that C. wuchihensis is closely related to Crocidura tanakae and Crocidura dongyangjiangensis based on the concatenated sequences of the 13 protein-coding genes. The characterization of the shrew’s mitogenome will provide the foundation for its use in population genomics and systematic studies of Soricidae.
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spelling pubmed-104947282023-09-12 The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis Tu, Feiyun Hou, Xiaodan Wang, Yi Mitochondrial DNA B Resour Mitogenome Announcement The Hainan Island Shrew Crocidura wuchihensis is a small-bodied insectivore species belonging to the Soricidae family. In this study, we determined its the complete mitochondrial genome. The whole mitochondrial genome was found to be 17,253 bp in length and comprises 13 protein-coding genes, 22 tRNAs, 2 rRNAs and a control region. The base composition of the C. wuchihensis total mitogenome as follows: A, 32.8%; G, 13.0%; T, 32.1%; and C, 22.1%, with an A + T content of 64.9%. Notably, a tandem repeat sequence (5′-CAC ACG TGT ACA-3′) was identified in the control region with 24 copy numbers. Additionally, phylogenetic analysis indicated that C. wuchihensis is closely related to Crocidura tanakae and Crocidura dongyangjiangensis based on the concatenated sequences of the 13 protein-coding genes. The characterization of the shrew’s mitogenome will provide the foundation for its use in population genomics and systematic studies of Soricidae. Taylor & Francis 2023-09-08 /pmc/articles/PMC10494728/ /pubmed/37701526 http://dx.doi.org/10.1080/23802359.2023.2256054 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Mitogenome Announcement
Tu, Feiyun
Hou, Xiaodan
Wang, Yi
The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title_full The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title_fullStr The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title_full_unstemmed The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title_short The complete mitochondrial genome of the Hainan Island Shrew, Crocidura wuchihensis
title_sort complete mitochondrial genome of the hainan island shrew, crocidura wuchihensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10494728/
https://www.ncbi.nlm.nih.gov/pubmed/37701526
http://dx.doi.org/10.1080/23802359.2023.2256054
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