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Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort
Osteosarcoma, a rare malignant tumor, has a poor prognosis. This study aimed to find the best prognostic model for osteosarcoma. There were 2912 patients included from the Surveillance, Epidemiology, and End Results (SEER) database and 225 patients from Hebei Province. Patients from the SEER databas...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Association of Basic Medical Sciences of Federation of Bosnia and Herzegovina
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10494842/ https://www.ncbi.nlm.nih.gov/pubmed/36967662 http://dx.doi.org/10.17305/bb.2023.8804 |
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author | Hao, Yahui Liang, Di Zhang, Shuo Wu, Siqi Li, Daojuan Wang, Yingying Shi, Miaomiao He, Yutong |
author_facet | Hao, Yahui Liang, Di Zhang, Shuo Wu, Siqi Li, Daojuan Wang, Yingying Shi, Miaomiao He, Yutong |
author_sort | Hao, Yahui |
collection | PubMed |
description | Osteosarcoma, a rare malignant tumor, has a poor prognosis. This study aimed to find the best prognostic model for osteosarcoma. There were 2912 patients included from the Surveillance, Epidemiology, and End Results (SEER) database and 225 patients from Hebei Province. Patients from the SEER database (2008–2015) were included in the development dataset. Patients from the SEER database (2004–2007) and Hebei Province cohort were included in the external test datasets. The Cox model and three tree-based machine learning algorithms (survival tree [ST], random survival forest [RSF], and gradient boosting machine [GBM]) were used to develop the prognostic models by 10-fold cross-validation with 200 iterations. Additionally, performance of models in the multivariable group was compared with the TNM group. The 3-year and 5-year cancer-specific survival (CSS) were 72.71% and 65.92% in the development dataset, respectively. The predictive ability in the multivariable group was superior to that in the TNM group. The calibration curves and consistency in the multivariable group were superior to those in the TNM group. The Cox and RSF models performed better than the ST and GBM models. A nomogram was constructed to predict the 3-year and 5-year CSS of osteosarcoma patients. The RSF model can be used as a nonparametric alternative to the Cox model. The constructed nomogram based on the Cox model can provide reference for clinicians to formulate specific therapeutic decisions both in America and China. |
format | Online Article Text |
id | pubmed-10494842 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Association of Basic Medical Sciences of Federation of Bosnia and Herzegovina |
record_format | MEDLINE/PubMed |
spelling | pubmed-104948422023-10-01 Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort Hao, Yahui Liang, Di Zhang, Shuo Wu, Siqi Li, Daojuan Wang, Yingying Shi, Miaomiao He, Yutong Biomol Biomed Research Article Osteosarcoma, a rare malignant tumor, has a poor prognosis. This study aimed to find the best prognostic model for osteosarcoma. There were 2912 patients included from the Surveillance, Epidemiology, and End Results (SEER) database and 225 patients from Hebei Province. Patients from the SEER database (2008–2015) were included in the development dataset. Patients from the SEER database (2004–2007) and Hebei Province cohort were included in the external test datasets. The Cox model and three tree-based machine learning algorithms (survival tree [ST], random survival forest [RSF], and gradient boosting machine [GBM]) were used to develop the prognostic models by 10-fold cross-validation with 200 iterations. Additionally, performance of models in the multivariable group was compared with the TNM group. The 3-year and 5-year cancer-specific survival (CSS) were 72.71% and 65.92% in the development dataset, respectively. The predictive ability in the multivariable group was superior to that in the TNM group. The calibration curves and consistency in the multivariable group were superior to those in the TNM group. The Cox and RSF models performed better than the ST and GBM models. A nomogram was constructed to predict the 3-year and 5-year CSS of osteosarcoma patients. The RSF model can be used as a nonparametric alternative to the Cox model. The constructed nomogram based on the Cox model can provide reference for clinicians to formulate specific therapeutic decisions both in America and China. Association of Basic Medical Sciences of Federation of Bosnia and Herzegovina 2023-10-01 2023-10-01 /pmc/articles/PMC10494842/ /pubmed/36967662 http://dx.doi.org/10.17305/bb.2023.8804 Text en © 2023 Hao et al. https://creativecommons.org/licenses/by/4.0/This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Hao, Yahui Liang, Di Zhang, Shuo Wu, Siqi Li, Daojuan Wang, Yingying Shi, Miaomiao He, Yutong Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title | Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title_full | Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title_fullStr | Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title_full_unstemmed | Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title_short | Machine learning for predicting the survival in osteosarcoma patients: Analysis based on American and Hebei Province cohort |
title_sort | machine learning for predicting the survival in osteosarcoma patients: analysis based on american and hebei province cohort |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10494842/ https://www.ncbi.nlm.nih.gov/pubmed/36967662 http://dx.doi.org/10.17305/bb.2023.8804 |
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